Gene: PGR004G1010

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR004G1010
  • Transcript Identifier PGR004G1010.01
  • Gene Type Coding gene
  • Location NC_045131.1 : 8955247-8959733 : positive

Gene Family Information

  • ID HOM05D002311
  • #Genes/#Species 293/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031398669.1
  • name LOC116209224
  • name XM_031542809.1
  • id gene-LOC116209224
  • uniprot A0A6P8DWA8

Descriptions

  • product putative elongation factor TypA-like SVR3, chloroplastic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G13650
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT5G13650
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G13650
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species AT5G13650
GO:0050821
ISO
PLAZA Integrative Orthologyprotein stabilization AT5G13650
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT5G13650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G13650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G13650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009000 Translation protein, beta-barrel domain superfamily
IPR042116 GTP-binding protein TypA/BipA, C-terminal
IPR005225 Small GTP-binding protein domain
IPR000795 Translational (tr)-type GTP-binding domain
IPR000640 Elongation factor EFG, domain V-like
IPR035647 EF-G domain III/V-like
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR035651 BipA, domain V
IPR006298 GTP-binding protein TypA
Mapman id Description
35.1 not assigned.annotated