Gene: Os11g0244800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0244800
  • Transcript Identifier Os11t0244800-01
  • Gene Type Coding gene
  • Location chr11 : 7777018-7784041 : negative

Gene Family Information

  • ID HOM05D000544
  • #Genes/#Species 1005/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0244800-01
  • MSU-ID LOC_Os11g14010.2
  • MSU-ID LOC_Os11g14010.1
  • uniprot Q2R837

Descriptions

  • Description Similar to Alfin-1.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G20510
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT2G02470
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT2G02470
GO:0055065
ISO
PLAZA Integrative Orthologymetal ion homeostasis AT2G02470
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G20510
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G20510
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT1G14510
GO:0003714
ISO
PLAZA Integrative Orthologytranscription corepressor activity AT5G20510
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G02470
GO:0042393
IEA
GOA Databasehistone binding
GO:0042393
IEA
InterProhistone binding
GO:0000976
IBA
GOA Databasetranscription cis-regulatory region binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G02470
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045104 Alfin
IPR019787 Zinc finger, PHD-finger
IPR001965 Zinc finger, PHD-type
IPR044104 Alfin1-like, PHD finger
IPR011011 Zinc finger, FYVE/PHD-type
IPR021998 Alfin, N-terminal
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.3.6.2.2 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (Alfin)