Gene: Os09g0402100
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os09g0402100
- Transcript Identifier Os09t0402100-01
- Gene Type Coding gene
- Location chr09 : 14106521-14107240 : negative
Gene Family Information
- ID HOM05D002447
- #Genes/#Species 278/90
- Phylogenetic origin
- ID ORTHO05D001298
- #Genes/#Species 437/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os09t0402100-01
- MSU-ID LOC_Os09g23730.1
- uniprot Q69MW7
Descriptions
- Description PF1 protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000014 | ISO | PLAZA Tree-based Orthology | regulation of endosperm development | Zm00001eb041850 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006334 | IEA | GOA Database | nucleosome assembly | |
| GO:0006334 | IEA | InterPro | nucleosome assembly | |
| GO:0030261 | IBA | GOA Database | chromosome condensation | |
| GO:0016584 | IBA | GOA Database | nucleosome positioning | |
| GO:0031936 | IBA | GOA Database | negative regulation of chromatin silencing | |
| GO:0045910 | IBA | GOA Database | negative regulation of DNA recombination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | ISO | PLAZA Tree-based Orthology | sequence-specific DNA binding | Zm00001eb041850 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0031492 | IBA | GOA Database | nucleosomal DNA binding | |
| GO:0003690 | IBA | GOA Database | double-stranded DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G14900 |
| GO:0000785 | IEA | GOA Database | chromatin | |
| GO:0000785 | IEA | InterPro | chromatin | |
| GO:0000786 | IEA | GOA Database | nucleosome | |
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005730 | IBA | GOA Database | nucleolus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |