Gene: Os08g0504600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os08g0504600
  • Transcript Identifier Os08t0504600-01
  • Gene Type Coding gene
  • Location chr08 : 24938970-24946247 : positive

Gene Family Information

  • ID HOM05D003126
  • #Genes/#Species 219/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os08t0504600-01
  • MSU-ID LOC_Os08g39440.2
  • MSU-ID LOC_Os08g39440.1
  • uniprot Q6ZK85

Descriptions

  • Description Nucleotide-binding, alpha-beta plait domain containing protein.
  • Description Similar to RNA recognition motif family protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:1900364
IBA
IEA
GOA Databasenegative regulation of mRNA polyadenylation
GO:1900364
IEA
InterPronegative regulation of mRNA polyadenylation
GO:0043488
IBA
IEA
GOA Databaseregulation of mRNA stability
GO:0043488
IEA
InterProregulation of mRNA stability

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008143
IBA
IEA
GOA Databasepoly(A) binding
GO:0008143
IEA
InterPropoly(A) binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR040366 Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14
IPR002483 PWI domain
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated