Gene: Os08g0220600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os08g0220600
  • Transcript Identifier Os08t0220600-01
  • Gene Type Coding gene
  • Location chr08 : 7339311-7341718 : negative

Gene Family Information

  • ID HOM05D000809
  • #Genes/#Species 730/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os08t0220600-01
  • MSU-ID LOC_Os08g12430.1
  • uniprot B9FZN0

Descriptions

  • Description Hypothetical conserved gene.
  • Description Fibronectin, type III domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061087
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K27 methylation AT5G57380
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT5G57380
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G30200
GO:0051571
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K4 methylation AT5G57380
GO:0048587
ISO
PLAZA Integrative Orthologyregulation of short-day photoperiodism, flowering AT4G30200
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT5G57380
GO:0032922
ISO
PLAZA Integrative Orthologycircadian regulation of gene expression AT4G30200
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G30200
GO:1900111
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K9 dimethylation AT4G30200
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT5G57380
GO:0040029
IEA
GOA Databaseregulation of gene expression, epigenetic
GO:0040029
IEA
InterProregulation of gene expression, epigenetic
GO:0010048
IEA
GOA Databasevernalization response
GO:0010048
IEA
InterProvernalization response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT4G30200
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G30200
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031519
ISO
PLAZA Integrative OrthologyPcG protein complex AT4G30200
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G30200
GO:0005677
ISO
PLAZA Integrative Orthologychromatin silencing complex AT4G30200
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G57380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044514 Vernalization insensitive 3-like
IPR032881 Oberon, PHD finger domain
IPR036116 Fibronectin type III superfamily
Mapman id Description
12.3.3.2.1.2.2 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting factor (VIN3/VEL)