Gene: Os06g0275000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0275000
  • Transcript Identifier Os06t0275000-01
  • Gene Type Coding gene
  • Location chr06 : 9336535-9338359 : positive

Gene Family Information

  • ID HOM05D001051
  • #Genes/#Species 579/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0275000-01
  • MSU-ID LOC_Os06g16370.1
  • symbol Rs
  • symbol Lm
  • symbol Se1(Lm
  • symbol Fl)
  • symbol Fl
  • symbol se(t)
  • symbol K
  • symbol qHD1(t)
  • symbol Hd1/OsA
  • symbol Se-1
  • symbol OsBBX18
  • symbol Hd1
  • symbol HD1
  • symbol OsCCT21
  • symbol Lf
  • symbol OsA
  • symbol Hd1(t)
  • symbol SE1
  • symbol Se1
  • name CO-LIKE and TOC1) domain protein 21
  • name CCT domain protein 21
  • name ortholog of Arabidopsis CONSTANS
  • name HEADING DATE 1
  • name CCT domain-containing gene 21
  • name Photosensitivity1
  • name CCT (CO
  • name Arabidopsis CONSTANS(CO) gene ortholog
  • name Heading date
  • name B-box-containing protein 18
  • name Photoperiod sensitivity 1
  • name Photosensitivity 1
  • name Photoperiod-sensitivity-1
  • uniprot Q9FDX8

Descriptions

  • Description Zinc finger protein, Heading date
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009909
IMP
IBA
GOA Databaseregulation of flower development
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT3G02380
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G15850
GO:0010018
ISO
PLAZA Integrative Orthologyfar-red light signaling pathway AT5G15840
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G24930
GO:0010161
ISO
PLAZA Integrative Orthologyred light signaling pathway AT2G24790
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT5G15840
GO:0032922
ISO
PLAZA Integrative Orthologycircadian regulation of gene expression AT5G24930
GO:0010099
ISO
PLAZA Integrative Orthologyregulation of photomorphogenesis AT2G24790
GO:0045892
IMP
GOA Databasenegative regulation of transcription, DNA-templated
GO:0048579
IMP
GOA Databasenegative regulation of long-day photoperiodism, flowering
GO:0048576
IMP
GOA Databasepositive regulation of short-day photoperiodism, flowering
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009908
IEA
GOA Databaseflower development
GO:0048572
IEP
GOA Databaseshort-day photoperiodism
GO:0048571
IEP
GOA Databaselong-day photoperiodism

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G24790
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G24790
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G15850
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003700
ISS
GOA DatabaseDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G24930
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010402 CCT domain
IPR000315 B-box-type zinc finger
Mapman id Description
15.5.1.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO)