Gene: Os06g0131700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0131700
  • Transcript Identifier Os06t0131700-01
  • Gene Type Coding gene
  • Location chr06 : 1700017-1702521 : negative

Gene Family Information

  • ID HOM05D000010
  • #Genes/#Species 9383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0131700-01
  • MSU-ID LOC_Os06g04090.1
  • symbol OsSWN1
  • name secondary wall-associated NAC domain protein 1
  • name secondary wall NAC transcription factor 1
  • uniprot Q9SNM6

Descriptions

  • Description No apical meristem (NAM) protein domain containing protein.
  • Description NAC transcription factor, Regulation of secondary wall biosynthesis
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0048829
ISO
PLAZA Integrative Orthologyroot cap development AT4G10350
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G61910
GO:0009809
ISO
PLAZA Integrative Orthologylignin biosynthetic process AT2G46770
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT4G10350
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT3G61910
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT3G61910
GO:0010047
ISO
PLAZA Integrative Orthologyfruit dehiscence AT2G46770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G46770
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G61910
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G32770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G32770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036093 NAC domain superfamily
IPR003441 NAC domain
Mapman id Description
15.5.17 RNA biosynthesis.transcriptional regulation.transcription factor (NAC)