Gene: Os06g0115500
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os06g0115500
- Transcript Identifier Os06t0115500-01
- Gene Type Coding gene
- Location chr06 : 867727-869332 : negative
Gene Family Information
- ID HOM05D001955
- #Genes/#Species 338/99
- Phylogenetic origin
- ID ORTHO05D001917
- #Genes/#Species 337/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os06t0115500-01
- MSU-ID LOC_Os06g02510.4
- MSU-ID LOC_Os06g02510.5
- MSU-ID LOC_Os06g02510.2
- MSU-ID LOC_Os06g02510.3
- MSU-ID LOC_Os06g02510.1
- uniprot Q9LWS2
Descriptions
- Description Similar to 60S ribosomal protein L13 (BBC1 protein homolog).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G49010 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IBA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G49010 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT3G49010 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G49010 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G49010 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G49010 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G49010 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G49010 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G23900 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0022625 | IBA | GOA Database | cytosolic large ribosomal subunit |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001380 | Ribosomal protein L13e |
| Mapman id | Description |
|---|---|
| 17.1.2.1.13 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL13 |