Gene: Os05g0560600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0560600
  • Transcript Identifier Os05t0560600-01
  • Gene Type Coding gene
  • Location chr05 : 27899604-27900644 : positive

Gene Family Information

  • ID HOM05D000815
  • #Genes/#Species 726/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0560600-01
  • MSU-ID LOC_Os05g48690.1
  • MSU-ID LOC_Os05g48690.2
  • uniprot Q688Y5

Descriptions

  • Description Homeodomain-like containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G54060
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G58630
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT3G11100
GO:0048831
ISO
PLAZA Integrative Orthologyregulation of shoot system development AT1G54060
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G54060
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G11100
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT1G54060
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT1G54060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IBA
GOA Databasetranscription cis-regulatory region binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G54060
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G58630
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT3G11100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G54060
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT3G11100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044823 Trihelix transcription factor ASIL1/2-like
IPR044822 Myb/SANT-like DNA-binding domain 4
Mapman id Description
15.5.20 RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix)