Gene: Os04g0561700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0561700
  • Transcript Identifier Os04t0561700-01
  • Gene Type Coding gene
  • Location chr04 : 28118317-28122571 : negative

Gene Family Information

  • ID HOM05D005865
  • #Genes/#Species 133/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0561700-01
  • MSU-ID LOC_Os04g47380.1
  • uniprot B9FBY4

Descriptions

  • Description Similar to H0211B05.2 protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0031119
IBA
GOA DatabasetRNA pseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0106029
IEA
GOA DatabasetRNA pseudouridine synthase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0009982
IBA
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039894 tRNA pseudouridine synthase Pus10-like
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
16.5.3.5 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (Pus10)