Gene: Os04g0546400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0546400
- Transcript Identifier Os04t0546400-01
- Gene Type Coding gene
- Location chr04 : 27358354-27360501 : positive
Gene Family Information
- ID HOM05D003706
- #Genes/#Species 185/99
- Phylogenetic origin
- ID ORTHO05D004487
- #Genes/#Species 179/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os04t0546400-01
- MSU-ID LOC_Os04g46190.1
- MSU-ID LOC_Os04g46190.2
- uniprot Q0JBA1
Descriptions
- Description Similar to ubiquitin carboxyl-terminal hydrolase isozyme L3.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004843 | IEA | GOA Database | thiol-dependent deubiquitinase | |
| GO:0004843 | IEA | InterPro | thiol-dependent deubiquitinase | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0008234 | IEA | GOA Database | cysteine-type peptidase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G17510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |