Gene: Os04g0538100
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0538100
- Transcript Identifier Os04t0538100-01
- Gene Type Coding gene
- Location chr04 : 26918121-26919740 : negative
Gene Family Information
- ID HOM05D001703
- #Genes/#Species 380/99
- Phylogenetic origin
- ID ORTHO05D007194
- #Genes/#Species 133/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Os04t0538100-01
- MSU-ID LOC_Os04g45490.1
- uniprot Q0JBE3
Descriptions
- Description Elongation factor G, III and V domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006414 | ISO | PLAZA Homology (enrichment) | translational elongation | HOM05D001703 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT1G62750 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G62750 |
| GO:0009791 | ISO | PLAZA Integrative Orthology | post-embryonic development | AT1G62750 |
| GO:0032790 | IBA | GOA Database | ribosome disassembly | |
| GO:0032543 | IBA | GOA Database | mitochondrial translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G62750 |
| GO:0003746 | ISO | PLAZA Homology (enrichment) | translation elongation factor activity | HOM05D001703 |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT1G62750 |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IBA | GOA Database | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G62750 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G62750 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G62750 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G62750 |
| GO:0005739 | IBA | GOA Database | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035649 | EFG, domain V |
| IPR000640 | Elongation factor EFG, domain V-like |
| IPR041095 | Elongation Factor G, domain II |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR005517 | Translation elongation factor EFG/EF2, domain IV |
| IPR035647 | EF-G domain III/V-like |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR009022 | Elongation factor G, domain III |
| Mapman id | Description |
|---|---|
| 17.7.4.3 | Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-G) |