Gene: Os04g0304400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0304400
- Transcript Identifier Os04t0304400-01
- Gene Type Coding gene
- Location chr04 : 13672893-13675093 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os04t0304400-01
- MSU-ID LOC_Os04g23910.1
- symbol OsMADS25
- name MADS-box transcription factor 25
- name MADS box gene25
- uniprot Q84NC5
Descriptions
- Description MADS-box transcription factor, Homologue of the AGL17-clade MADS-box genes, Regulation of root system development via auxin signalling
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000978 | IBA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |