Gene: Os03g0797500
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os03g0797500
- Transcript Identifier Os03t0797500-01
- Gene Type Coding gene
- Location chr03 : 33226729-33228396 : negative
Gene Family Information
- ID HOM05D003408
- #Genes/#Species 201/99
- Phylogenetic origin
- ID ORTHO05D003949
- #Genes/#Species 197/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os03t0797500-01
- MSU-ID LOC_Os03g58320.1
- uniprot Q7Y1J1
Descriptions
- Description Similar to Indole-3-glycerol phosphate lyase (Fragment).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000162 | IBA IEA | GOA Database | tryptophan biosynthetic process | |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G54640 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT3G54640 |
| GO:0052544 | ISO | PLAZA Integrative Orthology | defense response by callose deposition in cell wall | AT3G54640 |
| GO:0006568 | IEA | GOA Database | tryptophan metabolic process | |
| GO:0006568 | IEA | InterPro | tryptophan metabolic process | |
| GO:0009073 | IEA | GOA Database | aromatic amino acid family biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033984 | ISO | PLAZA Integrative Orthology | indole-3-glycerol-phosphate lyase activity | AT4G02610 |
| GO:0004834 | IBA IEA | GOA Database | tryptophan synthase activity | |
| GO:0004834 | IEA | InterPro | tryptophan synthase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016829 | IEA | GOA Database | lyase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G02610 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G54640 |
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0009507 | IBA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.5.3.5.1 | Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha |