Gene: Os03g0633400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os03g0633400
- Transcript Identifier Os03t0633400-01
- Gene Type Coding gene
- Location chr03 : 24193288-24197115 : positive
Gene Family Information
- ID HOM05D004045
- #Genes/#Species 173/94
- Phylogenetic origin
- ID ORTHO05D004923
- #Genes/#Species 168/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os03t0633400-01
- MSU-ID LOC_Os03g43390.4
- MSU-ID LOC_Os03g43390.2
- MSU-ID LOC_Os03g43390.3
- MSU-ID LOC_Os03g43390.1
- uniprot Q10GD3
Descriptions
- Description Similar to Leucine Rich Repeat family protein, expressed.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G54650 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G54650 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT3G54650 |
| GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT3G54650 |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT3G54650 |
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT3G54650 |
| GO:0031146 | ISO | PLAZA Integrative Orthology | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | AT3G54650 |
| GO:0055047 | ISO | PLAZA Integrative Orthology | generative cell mitosis | AT3G54650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G54650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035861 | ISO | PLAZA Integrative Orthology | site of double-strand break | AT3G54650 |
| GO:0001673 | ISO | PLAZA Integrative Orthology | male germ cell nucleus | AT3G54650 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G54650 |
| GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT3G54650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| Mapman id | Description |
|---|---|
| 13.1.2.5 | Cell cycle organisation.cell cycle control.regulation.regulatory factor (FBL17) |
| 19.2.2.8.1.4.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX) |