Gene: Os02g0828900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0828900
  • Transcript Identifier Os02t0828900-01
  • Gene Type Coding gene
  • Location chr02 : 35624194-35630389 : positive

Gene Family Information

  • ID HOM05D000451
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0828900-01
  • MSU-ID LOC_Os02g58210.1
  • MSU-ID LOC_Os02g58210.2
  • uniprot Q0DW71

Descriptions

  • Description Transcription factor jumonji domain containing protein.
  • Description Similar to JmjC domain containing protein, expressed.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G00990
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine AT3G07610
GO:0051567
ISO
PLAZA Integrative Orthologyhistone H3-K9 methylation AT1G62310
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT4G00990
GO:2000039
ISO
PLAZA Integrative Orthologyregulation of trichome morphogenesis AT1G62310
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G07610
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G07610
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G07610
GO:0060969
ISO
PLAZA Integrative Orthologynegative regulation of gene silencing AT3G07610
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G07610
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT3G07610
GO:0070919
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNA AT3G07610
GO:0033169
IEA
GOA Databasehistone H3-K9 demethylation
GO:0033169
IEA
InterProhistone H3-K9 demethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0031490
ISO
PLAZA Integrative Orthologychromatin DNA binding AT1G62310
GO:0032454
IEA
GOA Databasehistone demethylase activity (H3-K9 specific)
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G62310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR045109 Histone demethylase JHDM2-like
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)