Gene: Os02g0610600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0610600
  • Transcript Identifier Os02t0610600-01
  • Gene Type Coding gene
  • Location chr02 : 23992818-23996026 : negative

Gene Family Information

  • ID HOM05D002682
  • #Genes/#Species 256/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0610600-01
  • MSU-ID LOC_Os02g39720.2
  • MSU-ID LOC_Os02g39720.4
  • MSU-ID LOC_Os02g39720.3
  • MSU-ID LOC_Os02g39720.6
  • uniprot Q6K9C3

Descriptions

  • Description Similar to 9G8-like SR protein (RSZp22 splicing factor).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IDA
IBA
GOA DatabasemRNA splicing, via spliceosome
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G24590
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24590
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G23860
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G24590
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G24590
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
IBA
GOA Databasenuclear speck

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036875 Zinc finger, CCHC-type superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR001878 Zinc finger, CCHC-type
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21/22)