Gene: Os01g0208600
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os01g0208600
- Transcript Identifier Os01t0208600-01
- Gene Type Coding gene
- Location chr01 : 5890925-5897876 : positive
Gene Family Information
- ID HOM05D001720
- #Genes/#Species 376/94
- Phylogenetic origin
- ID ORTHO05D001813
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os01t0208600-01
- MSU-ID LOC_Os01g11040.1
- symbol SCAR1
- symbol ES1
- symbol OsSCAR1
- symbol TUT1/OsSCAR1
- symbol TUT1
- name early senescence 1
- name SCAR-like protein 2
- name suppressor of cAMP receptor 1
- uniprot Q5QNA6
Descriptions
- Description SCAR-like protein 2, Component of the suppressor of cAMP receptor/Wiskott-Aldrich syndrome protein family verprolin-homologous (SCAR/WAVE) complex, Actin organization, Panicle development, Regulation of water loss
- Description Actin-binding WH2 domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051127 | ISO | PLAZA Integrative Orthology | positive regulation of actin nucleation | AT2G34150 |
| GO:0030036 | IBA IEA | GOA Database | actin cytoskeleton organization | |
| GO:0030036 | IEA | InterPro | actin cytoskeleton organization | |
| GO:2000601 | IBA | GOA Database | positive regulation of Arp2/3 complex-mediated actin nucleation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003785 | ISO | PLAZA Integrative Orthology | actin monomer binding | AT2G34150 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G34150 |
| GO:0034237 | IBA | GOA Database | protein kinase A regulatory subunit binding | |
| GO:0071933 | IBA | GOA Database | Arp2/3 complex binding | |
| GO:0003779 | IEA | GOA Database | actin binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005856 | IEA | InterPro | cytoskeleton | |
| GO:0071944 | ISO | PLAZA Integrative Orthology | cell periphery | AT2G34150 |
| GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT2G34150 |
| GO:0031209 | ISO | PLAZA Integrative Orthology | SCAR complex | AT2G34150 |
| GO:0043229 | ISO | PLAZA Integrative Orthology | intracellular organelle | AT2G34150 |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR028288 | SCAR/WAVE family |
| Mapman id | Description |
|---|---|
| 20.2.2.2.4 | Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR |