Gene: Nitab4.5_0011811g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0011811g0010
- Transcript Identifier Nitab4.5_0011811g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0011811 : 32523-36634 : positive
Gene Family Information
- ID HOM05D000428
- #Genes/#Species 1201/100
- Phylogenetic origin
- ID ORTHO05D000582
- #Genes/#Species 762/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0011811g0010.1
- SR1-identifier Nta19g09660.2
Descriptions
- Description Nucleotide-binding, alpha-beta plait, RNA recognition motif domain, eukaryote, RNA recognition motif domain, Polyadenylate-binding protein/Hyperplastic disc protein, Polyadenylate binding protein, human types 1, 2, 3, 4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G23350 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G23350 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G23350 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G23350 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
IPR000504 | RNA recognition motif domain |
IPR035979 | RNA-binding domain superfamily |
IPR036053 | PABC (PABP) domain |
IPR003954 | RNA recognition motif domain, eukaryote |
IPR002004 | Polyadenylate-binding protein/Hyperplastic disc protein |
IPR006515 | Polyadenylate binding protein, human types 1, 2, 3, 4 |
Mapman id | Description |
---|---|
17.4.2.5 | Protein biosynthesis.translation initiation.mRNA loading.mRNA poly-A-tail binding factor (PABP) |