Gene: Nitab4.5_0010249g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0010249g0010
- Transcript Identifier Nitab4.5_0010249g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0010249 : 45403-57405 : positive
Gene Family Information
- ID HOM05D001469
- #Genes/#Species 431/96
- Phylogenetic origin
- ID ORTHO05D001648
- #Genes/#Species 375/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0010249g0010.1
- SR1-identifier Nta05g29160.1
Descriptions
- Description DNA-binding domain, C2 domain, AP2/ERF domain, von Willebrand factor, type A, Copine
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0019725 | ISO | PLAZA Integrative Orthology | cellular homeostasis | AT5G61900 |
| GO:0009270 | ISO | PLAZA Integrative Orthology | response to humidity | AT5G61900 |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT5G61900 |
| GO:0045793 | ISO | PLAZA Integrative Orthology | positive regulation of cell size | AT5G61900 |
| GO:0090332 | ISO | PLAZA Integrative Orthology | stomatal closure | AT1G08860 |
| GO:0060548 | ISO | PLAZA Integrative Orthology | negative regulation of cell death | AT1G08860 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005544 | IEA | InterPro | calcium-dependent phospholipid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G07300 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G07300 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G07300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR036955 | AP2/ERF domain superfamily |
| IPR000008 | C2 domain |
| IPR002035 | von Willebrand factor, type A |
| IPR001471 | AP2/ERF domain |
| IPR035892 | C2 domain superfamily |
| IPR037768 | Copine, C2B domain |
| IPR010734 | Copine, C-terminal |
| IPR016177 | DNA-binding domain superfamily |
| IPR045052 | Copine |