Gene: Nitab4.5_0008811g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0008811g0030
  • Transcript Identifier Nitab4.5_0008811g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0008811 : 43996-54464 : negative

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0008811g0030.1
  • SR1-identifier Nta12g23910.2

Descriptions

  • Description DNA mismatch repair protein MutS, core, DNA mismatch repair protein MutS, N-terminal, DNA mismatch repair protein MutS, C-terminal, DNA mismatch repair protein MutS, connector domain, DNA mismatch repair protein Msh6, DNA mismatch repair protein MutS, clamp, P-loop containing nucleoside triphosphate hydrolase, DNA mismatch repair protein MutS-homologue MSH6, DNA mismatch repair protein MutS-like, N-terminal
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0006290
ISO
PLAZA Integrative Orthologypyrimidine dimer repair AT4G02070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G02070
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT4G02070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR045076 DNA mismatch repair MutS family
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036678 MutS, connector domain superfamily
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR007860 DNA mismatch repair protein MutS, connector domain
IPR017261 DNA mismatch repair protein MutS/MSH
IPR007696 DNA mismatch repair protein MutS, core
IPR007861 DNA mismatch repair protein MutS, clamp
Mapman id Description
14.7.1.3 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH6