Gene: Nitab4.5_0007970g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0007970g0010
- Transcript Identifier Nitab4.5_0007970g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0007970 : 2920-5603 : positive
Gene Family Information
- ID HOM05D000032
- #Genes/#Species 5307/100
- Phylogenetic origin
- ID ORTHO05D004656
- #Genes/#Species 174/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0007970g0010.1
- SR1-identifier Nta11g02350.1
Descriptions
- Description Helicase, C-terminal, RNA helicase, DEAD-box type, Q motif, Zinc finger, CCHC-type, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, P-loop containing nucleoside triphosphate hydrolase, Helicase, superfamily 1/2, ATP-binding domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc03g117440.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003724 | IEA | InterPro | RNA helicase activity | |
| GO:0005524 | IEA | InterPro | ATP binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR001878 | Zinc finger, CCHC-type |
| IPR044113 | DDX41, DEAD-box helicase domain |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |