Gene: Nitab4.5_0004431g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0004431g0010
  • Transcript Identifier Nitab4.5_0004431g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0004431 : 74657-87188 : positive

Gene Family Information

  • ID HOM05D000706
  • #Genes/#Species 813/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0004431g0010.1
  • SR1-identifier Nta12g34140.1

Descriptions

  • Description Plus-3 domain, subgroup, GYF, Plus-3, Zinc finger, CCCH-type, SWIB/MDM2 domain, SWIB domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010964
ISO
PLAZA Integrative Orthologyregulation of heterochromatin assembly by small RNA AT2G16485
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine AT2G16485

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
IEA
InterProprotein binding
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT2G16485

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G16485
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G16485

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036885 SWIB/MDM2 domain superfamily
IPR004343 Plus-3 domain
IPR035445 GYF-like domain superfamily
IPR003169 GYF domain
IPR003121 SWIB/MDM2 domain
IPR019835 SWIB domain
IPR036128 Plus3-like superfamily
Mapman id Description
12.5.1.15.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.protein factor (NERD)