Gene: Nitab4.5_0004392g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0004392g0010
- Transcript Identifier Nitab4.5_0004392g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0004392 : 97640-99025 : positive
Gene Family Information
- ID HOM05D000835
- #Genes/#Species 712/100
- Phylogenetic origin
- ID ORTHO05D002122
- #Genes/#Species 315/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0004392g0010.1
- SR1-identifier Nta15g10330.1
Descriptions
- Description Elongation factor G, III-V domain, Translation protein, beta-barrel domain, Translation elongation factor EFG, V domain, Ribosomal protein S5 domain 2-type fold, subgroup, Ribosomal protein S5 domain 2-type fold, Translation elongation factor EFG/EF2, domain IV, Translation elongation factor EFTu/EF1A, domain 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G56070 |
| GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT1G56070 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | ISO | PLAZA Homology (enrichment) | GTPase activity | HOM05D000835 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G56070 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G56070 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G56070 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G56070 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G56070 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G56070 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G56070 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041095 | Elongation Factor G, domain II |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR005517 | Translation elongation factor EFG/EF2, domain IV |
| IPR000640 | Elongation factor EFG, domain V-like |
| IPR035647 | EF-G domain III/V-like |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |