Gene: Nitab4.5_0002364g0060
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0002364g0060
- Transcript Identifier Nitab4.5_0002364g0060.1
- Gene Type Coding gene
- Location Nitab4.5_0002364 : 310587-312194 : positive
Gene Family Information
- ID HOM05D002447
- #Genes/#Species 278/90
- Phylogenetic origin
- ID ORTHO05D001298
- #Genes/#Species 437/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0002364g0060.1
- SR1-identifier Nta07g01720.1
Descriptions
- Description Winged helix-turn-helix DNA-binding domain, AT hook, DNA-binding motif, Linker histone H1/H5, domain H15, AT hook-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006334 | IEA | InterPro | nucleosome assembly | |
| GO:2000014 | ISO | PLAZA Integrative Orthology | regulation of endosperm development | Zm00001eb041850 |
| GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D002447 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | Zm00001eb041850 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005634 | ISO | PLAZA Tree-based Orthology | nucleus | AT1G14900 |
| GO:0005829 | ISO | PLAZA Tree-based Orthology | cytosol | AT1G14900 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | Zm00001eb041850 |
| GO:0000785 | ISO | PLAZA Tree-based Orthology | chromatin | AT1G14900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |