Gene: Nitab4.5_0002280g0050
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0002280g0050
- Transcript Identifier Nitab4.5_0002280g0050.1
- Gene Type Coding gene
- Location Nitab4.5_0002280 : 406135-407919 : negative
Gene Family Information
- ID HOM05D001605
- #Genes/#Species 401/100
- Phylogenetic origin
- ID ORTHO05D003014
- #Genes/#Species 248/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0002280g0050.1
- SR1-identifier Nta07g22850.1
Descriptions
- Description Transcription elongation factor Spt5, NGN domain, KOW, Transcription antitermination protein NusG, N-terminal domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0032784 | IEA | InterPro | regulation of DNA-templated transcription, elongation | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039659 | Transcription elongation factor SPT5 |
| IPR005824 | KOW |
| IPR005100 | NGN domain |
| IPR006645 | NusG, N-terminal |
| IPR022581 | Spt5 transcription elongation factor, N-terminal |
| IPR014722 | Ribosomal protein L2, domain 2 |
| IPR041973 | Spt5, KOW domain repeat 1 |
| IPR039385 | NGN domain, eukaryotic |
| IPR036735 | NusG, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 15.3.5.3.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5 |