Gene: Medtr1g088180

General Information

Structural Information

  • Species Medicago truncatula
  • Gene Identifier Medtr1g088180
  • Transcript Identifier Medtr1g088180.1
  • Gene Type Coding gene
  • Location chr1 : 39402848-39408862 : negative

Gene Family Information

  • ID HOM05D001413
  • #Genes/#Species 444/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 31099690
  • id Medtr1g088180.JCVIMt4.0v1

Descriptions

  • Description ASF/SF2-like pre-mRNA splicing factor SRP32, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G02840
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G02840
GO:0035061
ISO
PLAZA Integrative Orthologyinterchromatin granule AT1G02840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005818 Linker histone H1/H5, domain H15
IPR000504 RNA recognition motif domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
16.2.6.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SR30/34)