Gene: Lsat_1_v5_gn_8_62300

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_8_62300
Transcript Identifier Lsat_1_v5_gn_8_62300.2
Gene Type Coding gene
Location Lsat_1_v8_lg_8 : 84357216-84361012 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002499
#Genes/#Species 272/100
Phylogenetic origin

ID ORTHO05D002812
#Genes/#Species 260/100
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Lsat_1_v5_gn_8_62300.v5
pacid 38951597

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010029	IEA	InterPro	regulation of seed germination
GO:0016567	IEA	InterPro	protein ubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G42160
GO:0046982	ISO	PLAZA Integrative Orthology	protein heterodimerization activity	AT2G42160

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000151	IEA	InterPro	ubiquitin ligase complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR001841	Zinc finger, RING-type
IPR011422	BRCA1-associated 2
IPR001607	Zinc finger, UBP-type
IPR033273	RING domain containing protein BRIZ1/BRIZ2

Mapman id	Description
19.2.2.1.4.3.3.4	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ)