Gene: Lsat_1_v5_gn_8_41561

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_41561
  • Transcript Identifier Lsat_1_v5_gn_8_41561.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 58221252-58224273 : positive

Gene Family Information

  • ID HOM05D003851
  • #Genes/#Species 180/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_41561.v5
  • pacid 38951228

Descriptions

  • Description K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043328
ISO
PLAZA Integrative Orthologyprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway AT1G15130
GO:0036257
ISO
PLAZA Integrative Orthologymultivesicular body organization AT1G15130
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT1G15130
GO:0099638
ISO
PLAZA Integrative Orthologyendosome to plasma membrane protein transport AT1G15130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT1G15130
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G15130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G15130
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G15130
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT1G15130
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G15130
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT1G15130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004328 BRO1 domain
IPR038499 BRO1 domain superfamily
IPR025304 ALIX V-shaped domain
Mapman id Description
22.4.3.2.2 Vesicle trafficking.endocytic trafficking.ubiquitylated cargo adaptation.cargo deubiquitination.deubiquitinase recruiting protein (BRO1)