Gene: Lsat_1_v5_gn_8_20201

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_8_20201
Transcript Identifier Lsat_1_v5_gn_8_20201.3
Gene Type Coding gene
Location Lsat_1_v8_lg_8 : 24804988-24808053 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000299
#Genes/#Species 1506/100
Phylogenetic origin

ID ORTHO05D000079
#Genes/#Species 2384/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Lsat_1_v5_gn_8_20201.v5
pacid 38952819

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0045893	ISO	PLAZA Homology (enrichment)	positive regulation of transcription, DNA-templated	HOM05D000299
GO:0007623	ISO	PLAZA Integrative Orthology	circadian rhythm	AT3G54810
GO:0009845	ISO	PLAZA Integrative Orthology	seed germination	AT3G54810

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0003677	ISO	PLAZA Homology (enrichment)	DNA binding	HOM05D000299
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G54810
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT3G54810

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Homology (enrichment)	nucleus	HOM05D000299

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000679	Zinc finger, GATA-type
IPR013088	Zinc finger, NHR/GATA-type

Mapman id	Description
15.5.1.3.1	RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)