Gene: AT3G54810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54810
  • Transcript Identifier AT3G54810.2
  • Gene Type Coding gene
  • Location Chr3 : 20296957-20298236 : positive

Gene Family Information

  • ID HOM05D000299
  • #Genes/#Species 1506/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54810.2
  • symbol BME3
  • Alias GATA8,GATA TRANSCRIPTION FACTOR 8
  • full_name BLUE MICROPYLAR END 3
  • uniprot Q9SV30

Descriptions

  • Description Plant-specific GATA-type zinc finger transcription factor family protein
  • Computational description BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
Gene Ontologypositive regulation of transcription, DNA-templated
GO:0045893
IEA
InterPropositive regulation of transcription, DNA-templated
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0030154
IBA
Gene Ontologycell differentiation1
GO:0007623
IEP
Gene Ontologycircadian rhythm2
GO:0009845
IMP
Gene Ontologyseed germination3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding5
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000679 Zinc finger, GATA-type
IPR013088 Zinc finger, NHR/GATA-type
IPR016679 Transcription factor, GATA, plant
Mapman id Description
15.5.1.3.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)