Gene: Lsat_1_v5_gn_8_165800

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_165800
  • Transcript Identifier Lsat_1_v5_gn_8_165800.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 305610182-305615858 : negative

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_165800.v5
  • pacid 38951049

Descriptions

  • Description K08737 - DNA mismatch repair protein MSH6 (MSH6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0006290
ISO
PLAZA Integrative Orthologypyrimidine dimer repair AT4G02070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G02070
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT4G02070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036678 MutS, connector domain superfamily
IPR017261 DNA mismatch repair protein MutS/MSH
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007861 DNA mismatch repair protein MutS, clamp
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR007696 DNA mismatch repair protein MutS, core
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR002999 Tudor domain
IPR045076 DNA mismatch repair MutS family
IPR007860 DNA mismatch repair protein MutS, connector domain
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
Mapman id Description
14.7.1.3 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH6