Gene: Lsat_1_v5_gn_8_116220

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_8_116220
Transcript Identifier Lsat_1_v5_gn_8_116220.1
Gene Type Coding gene
Location Lsat_1_v8_lg_8 : 178977797-178986543 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005293
#Genes/#Species 143/97
Phylogenetic origin

ID ORTHO05D006764
#Genes/#Species 138/97
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Lsat_1_v5_gn_8_116220.v5
pacid 38952937

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010196	ISO	PLAZA Integrative Orthology	nonphotochemical quenching	AT1G56500

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT1G56500
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G56500
GO:0009534	ISO	PLAZA Integrative Orthology	chloroplast thylakoid	AT1G56500
GO:0042651	ISO	PLAZA Integrative Orthology	thylakoid membrane	AT1G56500

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR023214	HAD superfamily
IPR000033	LDLR class B repeat
IPR012336	Thioredoxin-like fold
IPR006439	HAD hydrolase, subfamily IA
IPR001258	NHL repeat
IPR041492	Haloacid dehalogenase-like hydrolase
IPR036249	Thioredoxin-like superfamily
IPR036412	HAD-like superfamily
IPR023198	Phosphoglycolate phosphatase-like, domain 2
IPR011042	Six-bladed beta-propeller, TolB-like

Mapman id	Description
1.1.1.5.3.2.2	Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qH-type antenna quenching.NPQ-regulatory protein (SOQ1)