Gene: Lsat_1_v5_gn_7_85180

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_7_85180
  • Transcript Identifier Lsat_1_v5_gn_7_85180.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_7 : 142490835-142492867 : positive

Gene Family Information

  • ID HOM05D000385
  • #Genes/#Species 1271/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_7_85180.v5
  • pacid 38913377

Descriptions

  • Description PF00025//PF00917 - ADP-ribosylation factor family (Arf) // MATH domain (MATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048236
ISO
PLAZA Integrative Orthologyplant-type sporogenesis AT5G26290
GO:0048229
ISO
PLAZA Integrative Orthologygametophyte development AT5G26290

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G01390
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G26280
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G01390
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G04190
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G28220
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G69650
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G20370
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT5G26300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008974 TRAF-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR002083 MATH/TRAF domain
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase