Gene: Lsat_1_v5_gn_7_30101

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_7_30101
  • Transcript Identifier Lsat_1_v5_gn_7_30101.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_7 : 43928563-43930914 : negative

Gene Family Information

  • ID HOM05D001259
  • #Genes/#Species 497/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_7_30101.v5
  • pacid 38910581

Descriptions

  • Description PF00240//PF01432 - Ubiquitin family (ubiquitin) // Peptidase family M3 (Peptidase_M3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G35985
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G17840
GO:0002239
ISO
PLAZA Integrative Orthologyresponse to oomycetes AT4G35985
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G35985
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT2G17840
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT2G17840
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT2G17840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G51250
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G17840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001567 Peptidase M3A/M3B catalytic domain
IPR045036 Spartin-like
IPR000626 Ubiquitin-like domain
IPR024077 Neurolysin/Thimet oligopeptidase, domain 2
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
35.1 not assigned.annotated