Gene: Lsat_1_v5_gn_6_17400

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_17400
  • Transcript Identifier Lsat_1_v5_gn_6_17400.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 22413152-22414811 : positive

Gene Family Information

  • ID HOM05D007105
  • #Genes/#Species 112/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_17400.v5
  • pacid 38938032

Descriptions

  • Description PTHR13069:SF8 - 2-OXOGLUTARATE AND FE-DEPENDENT OXYGENASE FAMILY PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
ISO
PLAZA Integrative OrthologytRNA wobble uridine modification AT1G31600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated