Gene: Lsat_1_v5_gn_5_3700

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_3700
  • Transcript Identifier Lsat_1_v5_gn_5_3700.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 6340125-6341144 : negative

Gene Family Information

  • ID HOM05D000698
  • #Genes/#Species 816/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_3700.v5
  • pacid 38969495

Descriptions

  • Description K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000045
ISO
PLAZA Integrative Orthologyautophagosome assembly PGSC0003DMG402022314
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus PGSC0003DMG402022314

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G04620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane PGSC0003DMG402022314
GO:0005856
ISO
PLAZA Integrative Orthologycytoskeleton PGSC0003DMG402022314
GO:0000421
ISO
PLAZA Integrative Orthologyautophagosome membrane PGSC0003DMG402022314

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004241 Autophagy protein Atg8 ubiquitin-like
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
19.3.3.4.1 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ubiquitin-fold protein (ATG8)