Gene: Lsat_1_v5_gn_5_176940

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_176940
  • Transcript Identifier Lsat_1_v5_gn_5_176940.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 320168702-320174097 : negative

Gene Family Information

  • ID HOM05D000068
  • #Genes/#Species 3957/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_176940.v5
  • pacid 38971095

Descriptions

  • Description K05663 - mitochondrial ABC transporter ATM (ABC.ATM)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G58270
GO:0010288
ISO
PLAZA Integrative Orthologyresponse to lead ion AT5G58270
GO:0050790
ISO
PLAZA Integrative Orthologyregulation of catalytic activity AT5G58270
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT5G58270
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G58270
GO:0006879
ISO
PLAZA Integrative Orthologycellular iron ion homeostasis AT4G28630
GO:0006777
ISO
PLAZA Integrative OrthologyMo-molybdopterin cofactor biosynthetic process AT5G58270
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G58270
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G58270
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT5G58270
GO:0040014
ISO
PLAZA Integrative Orthologyregulation of multicellular organism growth AT5G58270
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
InterProABC-type transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G28620
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G58270
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G58270
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR039421 Type 1 protein exporter
IPR003439 ABC transporter-like, ATP-binding domain
IPR011527 ABC transporter type 1, transmembrane domain
IPR036640 ABC transporter type 1, transmembrane domain superfamily
Mapman id Description
24.1.3.1.1 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter
7.11.2.3.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.transport protein (ATM)