Gene: Lsat_1_v5_gn_5_146160
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_5_146160
- Transcript Identifier Lsat_1_v5_gn_5_146160.3
- Gene Type Coding gene
- Location Lsat_1_v8_lg_5 : 275338751-275339262 : positive
Gene Family Information
- ID HOM05D001088
- #Genes/#Species 563/99
- Phylogenetic origin
- ID ORTHO05D003028
- #Genes/#Species 247/82
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_5_146160.v5
- pacid 38969180
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation | |
| GO:0006914 | ISO | PLAZA Homology (enrichment) | autophagy | HOM05D001088 |
| GO:0048208 | ISO | PLAZA Homology (enrichment) | COPII vesicle coating | HOM05D001088 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G19750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT5G56670 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G56670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006846 | Ribosomal protein S30 |
| Mapman id | Description |
|---|---|
| 17.1.3.1.32 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS30 |