Gene: Lsat_1_v5_gn_5_126841
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_5_126841
- Transcript Identifier Lsat_1_v5_gn_5_126841.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_5 : 252006621-252013698 : negative
Gene Family Information
- ID HOM05D000868
- #Genes/#Species 692/99
- Phylogenetic origin
- ID ORTHO05D000711
- #Genes/#Species 658/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_5_126841.v5
- pacid 38966222
Descriptions
- Description PF00085//PF13371//PF13414//PF16211 - Thioredoxin (Thioredoxin) // Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) // C-terminus of histone H2A (Histone_H2A_C)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G53300 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G53300 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT2G42580 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G14950 |
| GO:0009742 | ISO | PLAZA Integrative Orthology | brassinosteroid mediated signaling pathway | AT2G42580 |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT2G42580 |
| GO:0009734 | ISO | PLAZA Integrative Orthology | auxin-activated signaling pathway | AT2G42580 |
| GO:0009789 | ISO | PLAZA Integrative Orthology | positive regulation of abscisic acid-activated signaling pathway | AT1G53300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G42580 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G42580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044534 | TPR repeat-containing thioredoxin TTL1-4 |
| IPR009072 | Histone-fold |
| IPR019734 | Tetratricopeptide repeat |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002119 | Histone H2A |
| IPR001440 | Tetratricopeptide repeat 1 |
| IPR013766 | Thioredoxin domain |
| IPR032454 | Histone H2A, C-terminal domain |
| IPR036249 | Thioredoxin-like superfamily |