Gene: Lsat_1_v5_gn_5_106621
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_5_106621
- Transcript Identifier Lsat_1_v5_gn_5_106621.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_5 : 226782491-226782691 : negative
Gene Family Information
- ID HOM05D001201
- #Genes/#Species 520/96
- Phylogenetic origin
- ID ORTHO05D229306
- #Genes/#Species 1 / 1(orphan gene)
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_5_106621.v5
- pacid 38964769
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080111 | IEA | InterPro | DNA demethylation | |
| GO:0006281 | ISO | PLAZA Homology (enrichment) | DNA repair | HOM05D001201 |
| GO:0006284 | ISO | PLAZA Homology (enrichment) | base-excision repair | HOM05D001201 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019104 | IEA | InterPro | DNA N-glycosylase activity | |
| GO:0035514 | IEA | InterPro | DNA demethylase activity | |
| GO:0003824 | ISO | PLAZA Homology (enrichment) | catalytic activity | HOM05D001201 |
| GO:0051539 | ISO | PLAZA Homology (enrichment) | 4 iron, 4 sulfur cluster binding | HOM05D001201 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044811 | DNA glycosylase, plant |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |