Gene: Lsat_1_v5_gn_5_103200

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_5_103200
Transcript Identifier Lsat_1_v5_gn_5_103200.1
Gene Type Coding gene
Location Lsat_1_v8_lg_5 : 220399062-220400108 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000123
#Genes/#Species 2785/100
Phylogenetic origin

ID ORTHO05D000064
#Genes/#Species 2617/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Lsat_1_v5_gn_5_103200.v5
pacid 38970420

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR10015:SF187 - HEAT STRESS TRANSCRIPTION FACTOR C-1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	Os01g0733200
GO:0006970	ISO	PLAZA Integrative Orthology	response to osmotic stress	Os01g0733200

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G24520

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	Os01g0733200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000232	Heat shock factor (HSF)-type, DNA-binding
IPR036390	Winged helix DNA-binding domain superfamily
IPR027725	Heat shock transcription factor family
IPR036388	Winged helix-like DNA-binding domain superfamily

Mapman id	Description
15.5.13	RNA biosynthesis.transcriptional regulation.transcription factor (HSF)