Gene: AT3G24520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G24520
  • Transcript Identifier AT3G24520.1
  • Gene Type Coding gene
  • Location Chr3 : 8941455-8942531 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G24520.1
  • symbol HSFC1
  • Alias AT-HSFC1
  • full_name heat shock transcription factor C1
  • uniprot Q9LV52

Descriptions

  • Description heat shock transcription factor C1
  • Computational description heat shock transcription factor C1 (HSFC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Interferon induced 35kDa, N-terminal (InterPro:IPR009938), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2230 Blast hits to 2217 proteins in 240 species: Archae - 2; Bacteria - 4; Metazoa - 382; Fungi - 481; Plants - 788; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress Os01g0733200
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid Os01g0733200
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0034605
IBA
Gene Ontologycellular response to heat1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)