Gene: Lsat_1_v5_gn_3_62800

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_3_62800
  • Transcript Identifier Lsat_1_v5_gn_3_62800.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_3 : 80591242-80596926 : positive

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_3_62800.v5
  • pacid 38917853

Descriptions

  • Description PF00319//PF01486//PF06839 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // K-box region (K-box) // GRF zinc finger (zf-GRF)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy AT2G22540
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT2G22540
GO:0009742
ISO
PLAZA Integrative Orthologybrassinosteroid mediated signaling pathway Os03g0186600
GO:0048438
ISO
PLAZA Integrative Orthologyfloral whorl development AT2G22540
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G22540
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT2G22540
GO:0010076
ISO
PLAZA Integrative Orthologymaintenance of floral meristem identity AT2G22540
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G22540
GO:0000900
ISO
PLAZA Integrative Orthologytranslation repressor activity, mRNA regulatory element binding AT2G22540
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G22540
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046983
IEA
InterProprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
IPR010666 Zinc finger, GRF-type
IPR033896 MADS MEF2-like
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)