Gene: Lsat_1_v5_gn_3_25341

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_3_25341
  • Transcript Identifier Lsat_1_v5_gn_3_25341.4
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_3 : 34256773-34260971 : positive

Gene Family Information

  • ID HOM05D002682
  • #Genes/#Species 256/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_3_25341.v5
  • pacid 38921175

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT4G31580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D002682
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G31580
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G31580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT4G31580
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G31580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21/22)