Gene: Lsat_1_v5_gn_3_136540
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_3_136540
- Transcript Identifier Lsat_1_v5_gn_3_136540.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_3 : 247439609-247441763 : positive
Gene Family Information
- ID HOM05D002154
- #Genes/#Species 311/97
- Phylogenetic origin
- ID ORTHO05D002362
- #Genes/#Species 294/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_3_136540.v5
- pacid 38918602
Descriptions
- Description K14397 - cleavage and polyadenylation specificity factor subunit 5 (NUDT21, CPSF5, CFIM25)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006378 | IEA | InterPro | mRNA polyadenylation | |
| GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT4G25550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G25550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005849 | IEA | InterPro | mRNA cleavage factor complex | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G25550 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016706 | Cleavage/polyadenylation specificity factor subunit 5 |
| Mapman id | Description |
|---|---|
| 16.3.1.4.1 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor I (CF-Im) complex.component CPFS5/CFIm25 |