Gene: Lsat_1_v5_gn_2_38321

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_2_38321
  • Transcript Identifier Lsat_1_v5_gn_2_38321.3
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_2 : 86378450-86382868 : positive

Gene Family Information

  • ID HOM05D000227
  • #Genes/#Species 1818/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_2_38321.v5
  • pacid 38963134

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010099
ISO
PLAZA Integrative Orthologyregulation of photomorphogenesis AT3G43810
GO:0009652
ISO
PLAZA Integrative Orthologythigmotropism AT2G41100
GO:0019722
ISO
PLAZA Integrative Orthologycalcium-mediated signaling AT4G14640
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G43810
GO:0009646
ISO
PLAZA Integrative Orthologyresponse to absence of light AT2G41100
GO:0009612
ISO
PLAZA Integrative Orthologyresponse to mechanical stimulus AT2G41100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14640
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G41100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G43810
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G41100
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G41100
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G43810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
Mapman id Description
27.7.1 Multi-process regulation.calcium-dependent signalling.calcium sensor (CaM)
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)