Gene: Lsat_1_v5_gn_2_21960

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_2_21960
  • Transcript Identifier Lsat_1_v5_gn_2_21960.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_2 : 49107394-49125893 : positive

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin
  • ID ORTHO05D233612
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_2_21960.v5
  • pacid 38959340

Descriptions

  • Description PF03479 - Domain of unknown function (DUF296) (DUF296)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR039605 AT-hook motif nuclear-localized protein
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)