Gene: Lsat_1_v5_gn_1_78540
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_1_78540
- Transcript Identifier Lsat_1_v5_gn_1_78540.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_1 : 94680313-94693539 : negative
Gene Family Information
- ID HOM05D000005
- #Genes/#Species 11550/84
- Phylogenetic origin
- ID ORTHO05D000012
- #Genes/#Species 5223/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_1_78540.v5
- pacid 38944680
Descriptions
- Description PF00931//PF01582//PF03947 - NB-ARC domain (NB-ARC) // TIR domain (TIR) // Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0007165 | IEA | InterPro | signal transduction |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003953 | IEA | InterPro | NAD+ nucleosidase activity | |
| GO:0043531 | IEA | InterPro | ADP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR044974 | Disease resistance protein, plants |
| IPR022669 | Ribosomal protein L2, C-terminal |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain |
| IPR014726 | Ribosomal protein L2, domain 3 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR002182 | NB-ARC |
| IPR008991 | Translation protein SH3-like domain superfamily |
| IPR042197 | Apoptotic protease-activating factors, helical domain |
| IPR014722 | Ribosomal protein L2, domain 2 |
| IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily |
| Mapman id | Description |
|---|---|
| 17.7.1.1.3 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL2-C-terminal |