Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 'fan', 'FAN12G3054' => 'fan', 'FAN14G2051' => 'fan', 'FAN17G0934' => 'fan', 'FAN17G3130' => 'fan', 'FAN19G0590' => 'fan', 'FAN22G1338' => 'fan', 'FAN23G0504' => 'fan', 'FAN26G2062' => 'fan', 'FAN28G0888' => 'fan', 'FvH4_1g26420' => 'fve', 'FvH4_4g11280' => 'fve', 'FvH4_4g21440' => 'fve', 'FvH4_6g21920' => 'fve', 'Glyma.02G008500' => 'gma', 'Glyma.03G146400' => 'gma', 'Glyma.03G223100' => 'gma', 'Glyma.07G234300' => 'gma', 'Glyma.09G109100' => 'gma', 'Glyma.10G009100' => 'gma', 'Glyma.10G295700' => 'gma', 'Glyma.17G039800' => 'gma', 'Glyma.19G149700' => 'gma', 'Glyma.19G220300' => 'gma', 'Glyma.20G245600' => 'gma', 'Gohir.A01G136900' => 'ghi', 'Gohir.A02G014500' => 'ghi', 'Gohir.A02G057800' => 'ghi', 'Gohir.A04G054600' => 'ghi', 'Gohir.A05G327100' => 'ghi', 'Gohir.A07G131200' => 'ghi', 'Gohir.A08G037500' => 'ghi', 'Gohir.A09G210200' => 'ghi', 'Gohir.A10G134500' => 'ghi', 'Gohir.A12G120800' => 'ghi', 'Gohir.D01G109925' => 'ghi', 'Gohir.D01G125100' => 'ghi', 'Gohir.D02G016100' => 'ghi', 'Gohir.D02G063600' => 'ghi', 'Gohir.D04G089100' => 'ghi', 'Gohir.D05G042200' => 'ghi', 'Gohir.D05G327200' => 'ghi', 'Gohir.D06G083866' => 'ghi', 'Gohir.D06G123450' => 'ghi', 'Gohir.D07G135500' => 'ghi', 'Gohir.D08G047800' => 'ghi', 'Gohir.D09G203600' => 'ghi', 'Gohir.D09G203650' => 'ghi', 'Gohir.D10G132000' => 'ghi', 'Gohir.D12G124600' => 'ghi', 'Gorai.001G073400' => 'gra', 'Gorai.001G147400' => 'gra', 'Gorai.002G155700' => 'gra', 'Gorai.004G047300' => 'gra', 'Gorai.005G019600' => 'gra', 'Gorai.005G071500' => 'gra', 'Gorai.006G227500' => 'gra', 'Gorai.008G135600' => 'gra', 'Gorai.009G351100' => 'gra', 'Gorai.011G145700' => 'gra', 'Gorai.012G099200' => 'gra', 'Gorai.013G116400' => 'gra', 'Gorai.013G161000' => 'gra', 'Gorai.013G181900' => 'gra', 'GSVIVG01013564001' => 'vvi', 'GSVIVG01017680001' => 'vvi', 'GSVIVG01028210001' => 'vvi', 'GSVIVG01033472001' => 'vvi', 'HanXRQChr01g0009401' => 'han', 'HanXRQChr02g0057811' => 'han', 'HanXRQChr05g0148331' => 'han', 'HanXRQChr06g0176151' => 'han', 'HanXRQChr07g0186721' => 'han', 'HanXRQChr10g0300601' => 'han', 'HanXRQChr10g0300611' => 'han', 'HanXRQChr11g0338501' => 'han', 'HanXRQChr11g0338511' => 'han', 'HanXRQChr11g0338531' => 'han', 'HanXRQChr13g0390071' => 'han', 'HanXRQChr15g0491341' => 'han', 'HanXRQChr15g0494791' => 'han', 'HanXRQChr17g0542811' => 'han', 'HanXRQChr17g0558351' => 'han', 'Haze_00713' => 'cav', 'Haze_00777' => 'cav', 'Haze_00779' => 'cav', 'Haze_00784' => 'cav', 'Haze_05127' => 'cav', 'Haze_20017' => 'cav', 'Hma1.2p1_0124F.1_g058230' => 'hma', 'Hma1.2p1_0408F.1_g146380' => 'hma', 'Hma1.2p1_0429F.1_g151100' => 'hma', 'Hma1.2p1_1160F.1_g262500' => 'hma', 'Hma1.2p1_1477F.1_g285920' => 'hma', 'Hma1.2p1_1478F.1_g286010' => 'hma', 'Hma1.2p1_2257F.1_g318240' => 'hma', 'HPP92_001943' => 'vpl', 'HPP92_006147' => 'vpl', 'HPP92_010874' => 'vpl', 'HPP92_011680' => 'vpl', 'HPP92_013586' => 'vpl', 'HPP92_016183' => 'vpl', 'HPP92_016184' => 'vpl', 'HPP92_016965' => 'vpl', 'HPP92_017030' => 'vpl', 'HPP92_017304' => 'vpl', 'HPP92_026733' => 'vpl', 'Hund11537' => 'sun', 'Hund12216' => 'sun', 'Hund12250' => 'sun', 'Hund14707' => 'sun', 'Hund19210' => 'sun', 'Lalb_Chr02g0144291' => 'lal', 'Lalb_Chr02g0147051' => 'lal', 'Lalb_Chr04g0259571' => 'lal', 'Lalb_Chr04g0260151' => 'lal', 'Lalb_Chr06g0164481' => 'lal', 'Lalb_Chr12g0200611' => 'lal', 'Lalb_Chr15g0077911' => 'lal', 'Lalb_Chr15g0079091' => 'lal', 'Lalb_Chr18g0048031' => 'lal', 'Lalb_Chr21g0307581' => 'lal', 'Lalb_Chr21g0309811' => 'lal', 'Lj1g0003375' => 'lja', 'Lj1g0005481' => 'lja', 'Lj2A365T87' => 'lonja', 'Lj3C232T7' => 'lonja', 'Lj3C840G6' => 'lonja', 'Lj4g0020755' => 'lja', 'Lj5g0004575' => 'lja', 'Lj5g0007259' => 'lja', 'Lj6A587T54' => 'lonja', 'Lj6A587T55' => 'lonja', 'Lj6A588T68' => 'lonja', 'Lj6A588T69' => 'lonja', 'Lj6A591G45' => 'lonja', 'Lj6A592G57' => 'lonja', 'Lj6A594G79' => 'lonja', 'Lj6A594T84' => 'lonja', 'Lj6A604G54' => 'lonja', 'Lj6A604T49' => 'lonja', 'Lj6A605T84' => 'lonja', 'Lj6A61G39' => 'lonja', 'Lj6A61T42' => 'lonja', 'Lj6A70G33' => 'lonja', 'Lj6C292T2' => 'lonja', 'Lj6C587G6' => 'lonja', 'Lj6C588G4' => 'lonja', 'Lj6C588T7' => 'lonja', 'Lj6C591T1' => 'lonja', 'Lj6C592G8' => 'lonja', 'Lj6C592G9' => 'lonja', 'Lj6C592T6' => 'lonja', 'Lj6C700T7' => 'lonja', 'Lj6P591T15' => 'lonja', 'Lju124A23T76' => 'lonja', 'Lsat_1_v5_gn_0_46480' => 'lsa', 'Lsat_1_v5_gn_1_39880' => 'lsa', 'Lsat_1_v5_gn_2_51700' => 'lsa', 'Lsat_1_v5_gn_5_165440' => 'lsa', 'Lsat_1_v5_gn_5_55640' => 'lsa', 'Lsat_1_v5_gn_6_54880' => 'lsa', 'Lsat_1_v5_gn_8_75181' => 'lsa', 'Lsat_1_v5_gn_9_25901' => 'lsa', 'Manes.01G233500' => 'mes', 'Manes.04G049100' => 'mes', 'Manes.05G010300' => 'mes', 'Manes.08G043000' => 'mes', 'Manes.09G037100' => 'mes', 'Manes.11G115900' => 'mes', 'Mapoly0051s0094' => 'mpo', 'MBI08_g33647_MAGBIO' => 'mbi', 'MBI11_g35032_MAGBIO' => 'mbi', 'MBI13_g20495_MAGBIO' => 'mbi', 'MBI18_g09630_MAGBIO' => 'mbi', 'MBI19_g17423_MAGBIO' => 'mbi', 'MBI19_g32727_MAGBIO' => 'mbi', 'MD04G1038500' => 'mdo', 'MD09G1292500' => 'mdo', 'MD12G1055000' => 'mdo', 'MD13G1141200' => 'mdo', 'MD13G1258500' => 'mdo', 'MD14G1054200' => 'mdo', 'MD16G1137300' => 'mdo', 'MD17G1283600' => 'mdo', 'Medtr1g054340' => 'mtr', 'Medtr1g086230' => 'mtr', 'Medtr1g116520' => 'mtr', 'Medtr4g123870' => 'mtr', 'Medtr7g093610' => 'mtr', 'Medtr8g014870' => 'mtr', 'MELO3C009609.2' => 'cme', 'MELO3C011622.2' => 'cme', 'MELO3C017693.2' => 'cme', 'MELO3C023605.2' => 'cme', 'MELO3C024036.2' => 'cme', 'Migut.D00023' => 'egut', 'Migut.J01854' => 'egut', 'Migut.K00029' => 'egut', 'Migut.N00007' => 'egut', 'Migut.N03114' => 'egut', 'Migut.O00204' => 'egut', 'Migut.O00859' => 'egut', 'MSTRG.15097' => 'ama', 'MSTRG.18063' => 'ama', 'MSTRG.19918' => 'ama', 'MSTRG.21744' => 'ama', 'MSTRG.21992' => 'ama', 'MSTRG.24587' => 'ama', 'MSTRG.26079' => 'ama', 'Nitab4.5_0000001g0020' => 'nta', 'Nitab4.5_0000009g0010' => 'nta', 'Nitab4.5_0000358g0010' => 'nta', 'Nitab4.5_0000698g0090' => 'nta', 'Nitab4.5_0000745g0140' => 'nta', 'Nitab4.5_0000895g0200' => 'nta', 'Nitab4.5_0000911g0010' => 'nta', 'Nitab4.5_0000978g0090' => 'nta', 'Nitab4.5_0001049g0070' => 'nta', 'Nitab4.5_0001079g0050' => 'nta', 'Nitab4.5_0001440g0070' => 'nta', 'Nitab4.5_0002466g0020' => 'nta', 'Nitab4.5_0004665g0030' => 'nta', 'Nitab4.5_0004962g0040' => 'nta', 'Nitab4.5_0007274g0040' => 'nta', 'Nitab4.5_0008086g0010' => 'nta', 'Nn2g15731' => 'nnu', 'Nn3g20224' => 'nnu', 'Nn3g21900' => 'nnu', 'Nn4g25401' => 'nnu', 'Nn7g35975' => 'nnu', 'Nn7g37669' => 'nnu', 'Oeu007529.2' => 'oeu', 'Oeu029566.1' => 'oeu', 'Oeu038066.1' => 'oeu', 'Oeu046721.1' => 'oeu', 'Oeu050350.1' => 'oeu', 'Oeu052152.2' => 'oeu', 'Oeu061588.2' => 'oeu', 'Oeu063570.1' => 'oeu', 'Os01g0310800' => 'osa', 'Os01g0323100' => 'osa', 'Os01g0899000' => 'osa', 'Os02g0565500' => 'osa', 'Os03g0226300' => 'osa', 'Os03g0719850' => 'osa', 'Os03g0844100' => 'osa', 'Os04g0490500' => 'osa', 'Os05g0135800' => 'osa', 'Os09g0513600' => 'osa', 'Peaxi162Scf00003g00461' => 'pax', 'Peaxi162Scf00076g00923' => 'pax', 'Peaxi162Scf00126g01128' => 'pax', 'Peaxi162Scf00164g00412' => 'pax', 'Peaxi162Scf00249g00123' => 'pax', 'Peaxi162Scf00258g00918' => 'pax', 'Peaxi162Scf00323g00815' => 'pax', 'Peaxi162Scf00586g00057' => 'pax', 'Peaxi162Scf00668g00445' => 'pax', 'PGR031G2951' => 'pgr', 'PGR042G0692' => 'pgr', 'PGR042G3468' => 'pgr', 'PGR083G0793' => 'pgr', 'PGR142G0588' => 'pgr', 'PGR142G3447' => 'pgr', 'PGSC0003DMG400004594' => 'stu', 'PGSC0003DMG400004687' => 'stu', 'PGSC0003DMG400011422' => 'stu', 'PGSC0003DMG400013232' => 'stu', 'PGSC0003DMG400017167' => 'stu', 'PGSC0003DMG400023704' => 'stu', 'PGSC0003DMG400026326' => 'stu', 'PGSC0003DMG400027204' => 'stu', 'Phvul.001G216800' => 'pvu', 'Phvul.003G120800' => 'pvu', 'Phvul.007G004200' => 'pvu', 'Phvul.007G210500' => 'pvu', 'Phvul.007G261200' => 'pvu', 'Potri.002G188600' => 'ptr', 'Potri.006G194000' => 'ptr', 'Potri.007G124000' => 'ptr', 'Potri.010G001500' => 'ptr', 'Potri.014G114200' => 'ptr', 'Potri.016G059600' => 'ptr', 'Potri.017G036300' => 'ptr', 'Pp3c17_15340' => 'ppa', 'Pp3c7_11260' => 'ppa', 'Pp3c7_11290' => 'ppa', 'Prupe.1G106400' => 'ppe', 'Prupe.1G189000' => 'ppe', 'Prupe.3G003900' => 'ppe', 'Prupe.7G080900' => 'ppe', 'Psat0s3307g0040' => 'psa', 'Psat0ss1196g0160' => 'psa', 'Psat1g108240' => 'psa', 'Psat3g067640' => 'psa', 'Psat3g161040' => 'psa', 'Psat4g059880' => 'psa', 'Psat6g088520' => 'psa', 'Psat6g159240' => 'psa', 'Psat6g241400' => 'psa', 'PSO017G0394' => 'pso', 'PSO063G3948' => 'pso', 'PSO170G0576' => 'pso', 'PSO210G1837' => 'pso', 'PSO210G4269' => 'pso', 'PSO339G6563' => 'pso', 'PSO357G0267' => 'pso', 'PSO384G3899' => 'pso', 'PSO541G0318' => 'pso', 'PSO675G6212' => 'pso', 'PSO675G8089' => 'pso', 'PSO761G0490' => 'pso', 'PSO832G1427' => 'pso', 'PSO832G3987' => 'pso', 'QL06p014100' => 'qlo', 'QL07p024443' => 'qlo', 'QL10p045419' => 'qlo', 'QL11p050064' => 'qlo', 'QL12p034471' => 'qlo', 'RcHm_v2.0_Chr3g0479251' => 'rch', 'RcHm_v2.0_Chr3g0486191' => 'rch', 'RcHm_v2.0_Chr3g0487491' => 'rch', 'RcHm_v2.0_Chr4g0407431' => 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000703', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000703' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 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=> 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000703' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000703' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000703' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 'fan', 'FAN12G3054' => 'fan', 'FAN14G2051' => 'fan', 'FAN17G0934' => 'fan', 'FAN17G3130' => 'fan', 'FAN19G0590' => 'fan', 'FAN22G1338' => 'fan', 'FAN23G0504' => 'fan', 'FAN26G2062' => 'fan', 'FAN28G0888' => 'fan', 'FvH4_1g26420' => 'fve', 'FvH4_4g11280' => 'fve', 'FvH4_4g21440' => 'fve', 'FvH4_6g21920' => 'fve', 'Glyma.02G008500' => 'gma', 'Glyma.03G146400' => 'gma', 'Glyma.03G223100' => 'gma', 'Glyma.07G234300' => 'gma', 'Glyma.09G109100' => 'gma', 'Glyma.10G009100' => 'gma', 'Glyma.10G295700' => 'gma', 'Glyma.17G039800' => 'gma', 'Glyma.19G149700' => 'gma', 'Glyma.19G220300' => 'gma', 'Glyma.20G245600' => 'gma', 'Gohir.A01G136900' => 'ghi', 'Gohir.A02G014500' => 'ghi', 'Gohir.A02G057800' => 'ghi', 'Gohir.A04G054600' => 'ghi', 'Gohir.A05G327100' => 'ghi', 'Gohir.A07G131200' => 'ghi', 'Gohir.A08G037500' => 'ghi', 'Gohir.A09G210200' => 'ghi', 'Gohir.A10G134500' => 'ghi', 'Gohir.A12G120800' => 'ghi', 'Gohir.D01G109925' => 'ghi', 'Gohir.D01G125100' => 'ghi', 'Gohir.D02G016100' => 'ghi', 'Gohir.D02G063600' => 'ghi', 'Gohir.D04G089100' => 'ghi', 'Gohir.D05G042200' => 'ghi', 'Gohir.D05G327200' => 'ghi', 'Gohir.D06G083866' => 'ghi', 'Gohir.D06G123450' => 'ghi', 'Gohir.D07G135500' => 'ghi', 'Gohir.D08G047800' => 'ghi', 'Gohir.D09G203600' => 'ghi', 'Gohir.D09G203650' => 'ghi', 'Gohir.D10G132000' => 'ghi', 'Gohir.D12G124600' => 'ghi', 'Gorai.001G073400' => 'gra', 'Gorai.001G147400' => 'gra', 'Gorai.002G155700' => 'gra', 'Gorai.004G047300' => 'gra', 'Gorai.005G019600' => 'gra', 'Gorai.005G071500' => 'gra', 'Gorai.006G227500' => 'gra', 'Gorai.008G135600' => 'gra', 'Gorai.009G351100' => 'gra', 'Gorai.011G145700' => 'gra', 'Gorai.012G099200' => 'gra', 'Gorai.013G116400' => 'gra', 'Gorai.013G161000' => 'gra', 'Gorai.013G181900' => 'gra', 'GSVIVG01013564001' => 'vvi', 'GSVIVG01017680001' => 'vvi', 'GSVIVG01028210001' => 'vvi', 'GSVIVG01033472001' => 'vvi', 'HanXRQChr01g0009401' => 'han', 'HanXRQChr02g0057811' => 'han', 'HanXRQChr05g0148331' => 'han', 'HanXRQChr06g0176151' => 'han', 'HanXRQChr07g0186721' => 'han', 'HanXRQChr10g0300601' => 'han', 'HanXRQChr10g0300611' => 'han', 'HanXRQChr11g0338501' => 'han', 'HanXRQChr11g0338511' => 'han', 'HanXRQChr11g0338531' => 'han', 'HanXRQChr13g0390071' => 'han', 'HanXRQChr15g0491341' => 'han', 'HanXRQChr15g0494791' => 'han', 'HanXRQChr17g0542811' => 'han', 'HanXRQChr17g0558351' => 'han', 'Haze_00713' => 'cav', 'Haze_00777' => 'cav', 'Haze_00779' => 'cav', 'Haze_00784' => 'cav', 'Haze_05127' => 'cav', 'Haze_20017' => 'cav', 'Hma1.2p1_0124F.1_g058230' => 'hma', 'Hma1.2p1_0408F.1_g146380' => 'hma', 'Hma1.2p1_0429F.1_g151100' => 'hma', 'Hma1.2p1_1160F.1_g262500' => 'hma', 'Hma1.2p1_1477F.1_g285920' => 'hma', 'Hma1.2p1_1478F.1_g286010' => 'hma', 'Hma1.2p1_2257F.1_g318240' => 'hma', 'HPP92_001943' => 'vpl', 'HPP92_006147' => 'vpl', 'HPP92_010874' => 'vpl', 'HPP92_011680' => 'vpl', 'HPP92_013586' => 'vpl', 'HPP92_016183' => 'vpl', 'HPP92_016184' => 'vpl', 'HPP92_016965' => 'vpl', 'HPP92_017030' => 'vpl', 'HPP92_017304' => 'vpl', 'HPP92_026733' => 'vpl', 'Hund11537' => 'sun', 'Hund12216' => 'sun', 'Hund12250' => 'sun', 'Hund14707' => 'sun', 'Hund19210' => 'sun', 'Lalb_Chr02g0144291' => 'lal', 'Lalb_Chr02g0147051' => 'lal', 'Lalb_Chr04g0259571' => 'lal', 'Lalb_Chr04g0260151' => 'lal', 'Lalb_Chr06g0164481' => 'lal', 'Lalb_Chr12g0200611' => 'lal', 'Lalb_Chr15g0077911' => 'lal', 'Lalb_Chr15g0079091' => 'lal', 'Lalb_Chr18g0048031' => 'lal', 'Lalb_Chr21g0307581' => 'lal', 'Lalb_Chr21g0309811' => 'lal', 'Lj1g0003375' => 'lja', 'Lj1g0005481' => 'lja', 'Lj2A365T87' => 'lonja', 'Lj3C232T7' => 'lonja', 'Lj3C840G6' => 'lonja', 'Lj4g0020755' => 'lja', 'Lj5g0004575' => 'lja', 'Lj5g0007259' => 'lja', 'Lj6A587T54' => 'lonja', 'Lj6A587T55' => 'lonja', 'Lj6A588T68' => 'lonja', 'Lj6A588T69' => 'lonja', 'Lj6A591G45' => 'lonja', 'Lj6A592G57' => 'lonja', 'Lj6A594G79' => 'lonja', 'Lj6A594T84' => 'lonja', 'Lj6A604G54' => 'lonja', 'Lj6A604T49' => 'lonja', 'Lj6A605T84' => 'lonja', 'Lj6A61G39' => 'lonja', 'Lj6A61T42' => 'lonja', 'Lj6A70G33' => 'lonja', 'Lj6C292T2' => 'lonja', 'Lj6C587G6' => 'lonja', 'Lj6C588G4' => 'lonja', 'Lj6C588T7' => 'lonja', 'Lj6C591T1' => 'lonja', 'Lj6C592G8' => 'lonja', 'Lj6C592G9' => 'lonja', 'Lj6C592T6' => 'lonja', 'Lj6C700T7' => 'lonja', 'Lj6P591T15' => 'lonja', 'Lju124A23T76' => 'lonja', 'Lsat_1_v5_gn_0_46480' => 'lsa', 'Lsat_1_v5_gn_1_39880' => 'lsa', 'Lsat_1_v5_gn_2_51700' => 'lsa', 'Lsat_1_v5_gn_5_165440' => 'lsa', 'Lsat_1_v5_gn_5_55640' => 'lsa', 'Lsat_1_v5_gn_6_54880' => 'lsa', 'Lsat_1_v5_gn_8_75181' => 'lsa', 'Lsat_1_v5_gn_9_25901' => 'lsa', 'Manes.01G233500' => 'mes', 'Manes.04G049100' => 'mes', 'Manes.05G010300' => 'mes', 'Manes.08G043000' => 'mes', 'Manes.09G037100' => 'mes', 'Manes.11G115900' => 'mes', 'Mapoly0051s0094' => 'mpo', 'MBI08_g33647_MAGBIO' => 'mbi', 'MBI11_g35032_MAGBIO' => 'mbi', 'MBI13_g20495_MAGBIO' => 'mbi', 'MBI18_g09630_MAGBIO' => 'mbi', 'MBI19_g17423_MAGBIO' => 'mbi', 'MBI19_g32727_MAGBIO' => 'mbi', 'MD04G1038500' => 'mdo', 'MD09G1292500' => 'mdo', 'MD12G1055000' => 'mdo', 'MD13G1141200' => 'mdo', 'MD13G1258500' => 'mdo', 'MD14G1054200' => 'mdo', 'MD16G1137300' => 'mdo', 'MD17G1283600' => 'mdo', 'Medtr1g054340' => 'mtr', 'Medtr1g086230' => 'mtr', 'Medtr1g116520' => 'mtr', 'Medtr4g123870' => 'mtr', 'Medtr7g093610' => 'mtr', 'Medtr8g014870' => 'mtr', 'MELO3C009609.2' => 'cme', 'MELO3C011622.2' => 'cme', 'MELO3C017693.2' => 'cme', 'MELO3C023605.2' => 'cme', 'MELO3C024036.2' => 'cme', 'Migut.D00023' => 'egut', 'Migut.J01854' => 'egut', 'Migut.K00029' => 'egut', 'Migut.N00007' => 'egut', 'Migut.N03114' => 'egut', 'Migut.O00204' => 'egut', 'Migut.O00859' => 'egut', 'MSTRG.15097' => 'ama', 'MSTRG.18063' => 'ama', 'MSTRG.19918' => 'ama', 'MSTRG.21744' => 'ama', 'MSTRG.21992' => 'ama', 'MSTRG.24587' => 'ama', 'MSTRG.26079' => 'ama', 'Nitab4.5_0000001g0020' => 'nta', 'Nitab4.5_0000009g0010' => 'nta', 'Nitab4.5_0000358g0010' => 'nta', 'Nitab4.5_0000698g0090' => 'nta', 'Nitab4.5_0000745g0140' => 'nta', 'Nitab4.5_0000895g0200' => 'nta', 'Nitab4.5_0000911g0010' => 'nta', 'Nitab4.5_0000978g0090' => 'nta', 'Nitab4.5_0001049g0070' => 'nta', 'Nitab4.5_0001079g0050' => 'nta', 'Nitab4.5_0001440g0070' => 'nta', 'Nitab4.5_0002466g0020' => 'nta', 'Nitab4.5_0004665g0030' => 'nta', 'Nitab4.5_0004962g0040' => 'nta', 'Nitab4.5_0007274g0040' => 'nta', 'Nitab4.5_0008086g0010' => 'nta', 'Nn2g15731' => 'nnu', 'Nn3g20224' => 'nnu', 'Nn3g21900' => 'nnu', 'Nn4g25401' => 'nnu', 'Nn7g35975' => 'nnu', 'Nn7g37669' => 'nnu', 'Oeu007529.2' => 'oeu', 'Oeu029566.1' => 'oeu', 'Oeu038066.1' => 'oeu', 'Oeu046721.1' => 'oeu', 'Oeu050350.1' => 'oeu', 'Oeu052152.2' => 'oeu', 'Oeu061588.2' => 'oeu', 'Oeu063570.1' => 'oeu', 'Os01g0310800' => 'osa', 'Os01g0323100' => 'osa', 'Os01g0899000' => 'osa', 'Os02g0565500' => 'osa', 'Os03g0226300' => 'osa', 'Os03g0719850' => 'osa', 'Os03g0844100' => 'osa', 'Os04g0490500' => 'osa', 'Os05g0135800' => 'osa', 'Os09g0513600' => 'osa', 'Peaxi162Scf00003g00461' => 'pax', 'Peaxi162Scf00076g00923' => 'pax', 'Peaxi162Scf00126g01128' => 'pax', 'Peaxi162Scf00164g00412' => 'pax', 'Peaxi162Scf00249g00123' => 'pax', 'Peaxi162Scf00258g00918' => 'pax', 'Peaxi162Scf00323g00815' => 'pax', 'Peaxi162Scf00586g00057' => 'pax', 'Peaxi162Scf00668g00445' => 'pax', 'PGR031G2951' => 'pgr', 'PGR042G0692' => 'pgr', 'PGR042G3468' => 'pgr', 'PGR083G0793' => 'pgr', 'PGR142G0588' => 'pgr', 'PGR142G3447' => 'pgr', 'PGSC0003DMG400004594' => 'stu', 'PGSC0003DMG400004687' => 'stu', 'PGSC0003DMG400011422' => 'stu', 'PGSC0003DMG400013232' => 'stu', 'PGSC0003DMG400017167' => 'stu', 'PGSC0003DMG400023704' => 'stu', 'PGSC0003DMG400026326' => 'stu', 'PGSC0003DMG400027204' => 'stu', 'Phvul.001G216800' => 'pvu', 'Phvul.003G120800' => 'pvu', 'Phvul.007G004200' => 'pvu', 'Phvul.007G210500' => 'pvu', 'Phvul.007G261200' => 'pvu', 'Potri.002G188600' => 'ptr', 'Potri.006G194000' => 'ptr', 'Potri.007G124000' => 'ptr', 'Potri.010G001500' => 'ptr', 'Potri.014G114200' => 'ptr', 'Potri.016G059600' => 'ptr', 'Potri.017G036300' => 'ptr', 'Pp3c17_15340' => 'ppa', 'Pp3c7_11260' => 'ppa', 'Pp3c7_11290' => 'ppa', 'Prupe.1G106400' => 'ppe', 'Prupe.1G189000' => 'ppe', 'Prupe.3G003900' => 'ppe', 'Prupe.7G080900' => 'ppe', 'Psat0s3307g0040' => 'psa', 'Psat0ss1196g0160' => 'psa', 'Psat1g108240' => 'psa', 'Psat3g067640' => 'psa', 'Psat3g161040' => 'psa', 'Psat4g059880' => 'psa', 'Psat6g088520' => 'psa', 'Psat6g159240' => 'psa', 'Psat6g241400' => 'psa', 'PSO017G0394' => 'pso', 'PSO063G3948' => 'pso', 'PSO170G0576' => 'pso', 'PSO210G1837' => 'pso', 'PSO210G4269' => 'pso', 'PSO339G6563' => 'pso', 'PSO357G0267' => 'pso', 'PSO384G3899' => 'pso', 'PSO541G0318' => 'pso', 'PSO675G6212' => 'pso', 'PSO675G8089' => 'pso', 'PSO761G0490' => 'pso', 'PSO832G1427' => 'pso', 'PSO832G3987' => 'pso', 'QL06p014100' => 'qlo', 'QL07p024443' => 'qlo', 'QL10p045419' => 'qlo', 'QL11p050064' => 'qlo', 'QL12p034471' => 'qlo', 'RcHm_v2.0_Chr3g0479251' => 'rch', 'RcHm_v2.0_Chr3g0486191' => 'rch', 'RcHm_v2.0_Chr3g0487491' => 'rch', 'RcHm_v2.0_Chr4g0407431' => 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000703', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000703' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 'fan', 'FAN12G3054' => 'fan', 'FAN14G2051' => 'fan', 'FAN17G0934' => 'fan', 'FAN17G3130' => 'fan', 'FAN19G0590' => 'fan', 'FAN22G1338' => 'fan', 'FAN23G0504' => 'fan', 'FAN26G2062' => 'fan', 'FAN28G0888' => 'fan', 'FvH4_1g26420' => 'fve', 'FvH4_4g11280' => 'fve', 'FvH4_4g21440' => 'fve', 'FvH4_6g21920' => 'fve', 'Glyma.02G008500' => 'gma', 'Glyma.03G146400' => 'gma', 'Glyma.03G223100' => 'gma', 'Glyma.07G234300' => 'gma', 'Glyma.09G109100' => 'gma', 'Glyma.10G009100' => 'gma', 'Glyma.10G295700' => 'gma', 'Glyma.17G039800' => 'gma', 'Glyma.19G149700' => 'gma', 'Glyma.19G220300' => 'gma', 'Glyma.20G245600' => 'gma', 'Gohir.A01G136900' => 'ghi', 'Gohir.A02G014500' => 'ghi', 'Gohir.A02G057800' => 'ghi', 'Gohir.A04G054600' => 'ghi', 'Gohir.A05G327100' => 'ghi', 'Gohir.A07G131200' => 'ghi', 'Gohir.A08G037500' => 'ghi', 'Gohir.A09G210200' => 'ghi', 'Gohir.A10G134500' => 'ghi', 'Gohir.A12G120800' => 'ghi', 'Gohir.D01G109925' => 'ghi', 'Gohir.D01G125100' => 'ghi', 'Gohir.D02G016100' => 'ghi', 'Gohir.D02G063600' => 'ghi', 'Gohir.D04G089100' => 'ghi', 'Gohir.D05G042200' => 'ghi', 'Gohir.D05G327200' => 'ghi', 'Gohir.D06G083866' => 'ghi', 'Gohir.D06G123450' => 'ghi', 'Gohir.D07G135500' => 'ghi', 'Gohir.D08G047800' => 'ghi', 'Gohir.D09G203600' => 'ghi', 'Gohir.D09G203650' => 'ghi', 'Gohir.D10G132000' => 'ghi', 'Gohir.D12G124600' => 'ghi', 'Gorai.001G073400' => 'gra', 'Gorai.001G147400' => 'gra', 'Gorai.002G155700' => 'gra', 'Gorai.004G047300' => 'gra', 'Gorai.005G019600' => 'gra', 'Gorai.005G071500' => 'gra', 'Gorai.006G227500' => 'gra', 'Gorai.008G135600' => 'gra', 'Gorai.009G351100' => 'gra', 'Gorai.011G145700' => 'gra', 'Gorai.012G099200' => 'gra', 'Gorai.013G116400' => 'gra', 'Gorai.013G161000' => 'gra', 'Gorai.013G181900' => 'gra', 'GSVIVG01013564001' => 'vvi', 'GSVIVG01017680001' => 'vvi', 'GSVIVG01028210001' => 'vvi', 'GSVIVG01033472001' => 'vvi', 'HanXRQChr01g0009401' => 'han', 'HanXRQChr02g0057811' => 'han', 'HanXRQChr05g0148331' => 'han', 'HanXRQChr06g0176151' => 'han', 'HanXRQChr07g0186721' => 'han', 'HanXRQChr10g0300601' => 'han', 'HanXRQChr10g0300611' => 'han', 'HanXRQChr11g0338501' => 'han', 'HanXRQChr11g0338511' => 'han', 'HanXRQChr11g0338531' => 'han', 'HanXRQChr13g0390071' => 'han', 'HanXRQChr15g0491341' => 'han', 'HanXRQChr15g0494791' => 'han', 'HanXRQChr17g0542811' => 'han', 'HanXRQChr17g0558351' => 'han', 'Haze_00713' => 'cav', 'Haze_00777' => 'cav', 'Haze_00779' => 'cav', 'Haze_00784' => 'cav', 'Haze_05127' => 'cav', 'Haze_20017' => 'cav', 'Hma1.2p1_0124F.1_g058230' => 'hma', 'Hma1.2p1_0408F.1_g146380' => 'hma', 'Hma1.2p1_0429F.1_g151100' => 'hma', 'Hma1.2p1_1160F.1_g262500' => 'hma', 'Hma1.2p1_1477F.1_g285920' => 'hma', 'Hma1.2p1_1478F.1_g286010' => 'hma', 'Hma1.2p1_2257F.1_g318240' => 'hma', 'HPP92_001943' => 'vpl', 'HPP92_006147' => 'vpl', 'HPP92_010874' => 'vpl', 'HPP92_011680' => 'vpl', 'HPP92_013586' => 'vpl', 'HPP92_016183' => 'vpl', 'HPP92_016184' => 'vpl', 'HPP92_016965' => 'vpl', 'HPP92_017030' => 'vpl', 'HPP92_017304' => 'vpl', 'HPP92_026733' => 'vpl', 'Hund11537' => 'sun', 'Hund12216' => 'sun', 'Hund12250' => 'sun', 'Hund14707' => 'sun', 'Hund19210' => 'sun', 'Lalb_Chr02g0144291' => 'lal', 'Lalb_Chr02g0147051' => 'lal', 'Lalb_Chr04g0259571' => 'lal', 'Lalb_Chr04g0260151' => 'lal', 'Lalb_Chr06g0164481' => 'lal', 'Lalb_Chr12g0200611' => 'lal', 'Lalb_Chr15g0077911' => 'lal', 'Lalb_Chr15g0079091' => 'lal', 'Lalb_Chr18g0048031' => 'lal', 'Lalb_Chr21g0307581' => 'lal', 'Lalb_Chr21g0309811' => 'lal', 'Lj1g0003375' => 'lja', 'Lj1g0005481' => 'lja', 'Lj2A365T87' => 'lonja', 'Lj3C232T7' => 'lonja', 'Lj3C840G6' => 'lonja', 'Lj4g0020755' => 'lja', 'Lj5g0004575' => 'lja', 'Lj5g0007259' => 'lja', 'Lj6A587T54' => 'lonja', 'Lj6A587T55' => 'lonja', 'Lj6A588T68' => 'lonja', 'Lj6A588T69' => 'lonja', 'Lj6A591G45' => 'lonja', 'Lj6A592G57' => 'lonja', 'Lj6A594G79' => 'lonja', 'Lj6A594T84' => 'lonja', 'Lj6A604G54' => 'lonja', 'Lj6A604T49' => 'lonja', 'Lj6A605T84' => 'lonja', 'Lj6A61G39' => 'lonja', 'Lj6A61T42' => 'lonja', 'Lj6A70G33' => 'lonja', 'Lj6C292T2' => 'lonja', 'Lj6C587G6' => 'lonja', 'Lj6C588G4' => 'lonja', 'Lj6C588T7' => 'lonja', 'Lj6C591T1' => 'lonja', 'Lj6C592G8' => 'lonja', 'Lj6C592G9' => 'lonja', 'Lj6C592T6' => 'lonja', 'Lj6C700T7' => 'lonja', 'Lj6P591T15' => 'lonja', 'Lju124A23T76' => 'lonja', 'Lsat_1_v5_gn_0_46480' => 'lsa', 'Lsat_1_v5_gn_1_39880' => 'lsa', 'Lsat_1_v5_gn_2_51700' => 'lsa', 'Lsat_1_v5_gn_5_165440' => 'lsa', 'Lsat_1_v5_gn_5_55640' => 'lsa', 'Lsat_1_v5_gn_6_54880' => 'lsa', 'Lsat_1_v5_gn_8_75181' => 'lsa', 'Lsat_1_v5_gn_9_25901' => 'lsa', 'Manes.01G233500' => 'mes', 'Manes.04G049100' => 'mes', 'Manes.05G010300' => 'mes', 'Manes.08G043000' => 'mes', 'Manes.09G037100' => 'mes', 'Manes.11G115900' => 'mes', 'Mapoly0051s0094' => 'mpo', 'MBI08_g33647_MAGBIO' => 'mbi', 'MBI11_g35032_MAGBIO' => 'mbi', 'MBI13_g20495_MAGBIO' => 'mbi', 'MBI18_g09630_MAGBIO' => 'mbi', 'MBI19_g17423_MAGBIO' => 'mbi', 'MBI19_g32727_MAGBIO' => 'mbi', 'MD04G1038500' => 'mdo', 'MD09G1292500' => 'mdo', 'MD12G1055000' => 'mdo', 'MD13G1141200' => 'mdo', 'MD13G1258500' => 'mdo', 'MD14G1054200' => 'mdo', 'MD16G1137300' => 'mdo', 'MD17G1283600' => 'mdo', 'Medtr1g054340' => 'mtr', 'Medtr1g086230' => 'mtr', 'Medtr1g116520' => 'mtr', 'Medtr4g123870' => 'mtr', 'Medtr7g093610' => 'mtr', 'Medtr8g014870' => 'mtr', 'MELO3C009609.2' => 'cme', 'MELO3C011622.2' => 'cme', 'MELO3C017693.2' => 'cme', 'MELO3C023605.2' => 'cme', 'MELO3C024036.2' => 'cme', 'Migut.D00023' => 'egut', 'Migut.J01854' => 'egut', 'Migut.K00029' => 'egut', 'Migut.N00007' => 'egut', 'Migut.N03114' => 'egut', 'Migut.O00204' => 'egut', 'Migut.O00859' => 'egut', 'MSTRG.15097' => 'ama', 'MSTRG.18063' => 'ama', 'MSTRG.19918' => 'ama', 'MSTRG.21744' => 'ama', 'MSTRG.21992' => 'ama', 'MSTRG.24587' => 'ama', 'MSTRG.26079' => 'ama', 'Nitab4.5_0000001g0020' => 'nta', 'Nitab4.5_0000009g0010' => 'nta', 'Nitab4.5_0000358g0010' => 'nta', 'Nitab4.5_0000698g0090' => 'nta', 'Nitab4.5_0000745g0140' => 'nta', 'Nitab4.5_0000895g0200' => 'nta', 'Nitab4.5_0000911g0010' => 'nta', 'Nitab4.5_0000978g0090' => 'nta', 'Nitab4.5_0001049g0070' => 'nta', 'Nitab4.5_0001079g0050' => 'nta', 'Nitab4.5_0001440g0070' => 'nta', 'Nitab4.5_0002466g0020' => 'nta', 'Nitab4.5_0004665g0030' => 'nta', 'Nitab4.5_0004962g0040' => 'nta', 'Nitab4.5_0007274g0040' => 'nta', 'Nitab4.5_0008086g0010' => 'nta', 'Nn2g15731' => 'nnu', 'Nn3g20224' => 'nnu', 'Nn3g21900' => 'nnu', 'Nn4g25401' => 'nnu', 'Nn7g35975' => 'nnu', 'Nn7g37669' => 'nnu', 'Oeu007529.2' => 'oeu', 'Oeu029566.1' => 'oeu', 'Oeu038066.1' => 'oeu', 'Oeu046721.1' => 'oeu', 'Oeu050350.1' => 'oeu', 'Oeu052152.2' => 'oeu', 'Oeu061588.2' => 'oeu', 'Oeu063570.1' => 'oeu', 'Os01g0310800' => 'osa', 'Os01g0323100' => 'osa', 'Os01g0899000' => 'osa', 'Os02g0565500' => 'osa', 'Os03g0226300' => 'osa', 'Os03g0719850' => 'osa', 'Os03g0844100' => 'osa', 'Os04g0490500' => 'osa', 'Os05g0135800' => 'osa', 'Os09g0513600' => 'osa', 'Peaxi162Scf00003g00461' => 'pax', 'Peaxi162Scf00076g00923' => 'pax', 'Peaxi162Scf00126g01128' => 'pax', 'Peaxi162Scf00164g00412' => 'pax', 'Peaxi162Scf00249g00123' => 'pax', 'Peaxi162Scf00258g00918' => 'pax', 'Peaxi162Scf00323g00815' => 'pax', 'Peaxi162Scf00586g00057' => 'pax', 'Peaxi162Scf00668g00445' => 'pax', 'PGR031G2951' => 'pgr', 'PGR042G0692' => 'pgr', 'PGR042G3468' => 'pgr', 'PGR083G0793' => 'pgr', 'PGR142G0588' => 'pgr', 'PGR142G3447' => 'pgr', 'PGSC0003DMG400004594' => 'stu', 'PGSC0003DMG400004687' => 'stu', 'PGSC0003DMG400011422' => 'stu', 'PGSC0003DMG400013232' => 'stu', 'PGSC0003DMG400017167' => 'stu', 'PGSC0003DMG400023704' => 'stu', 'PGSC0003DMG400026326' => 'stu', 'PGSC0003DMG400027204' => 'stu', 'Phvul.001G216800' => 'pvu', 'Phvul.003G120800' => 'pvu', 'Phvul.007G004200' => 'pvu', 'Phvul.007G210500' => 'pvu', 'Phvul.007G261200' => 'pvu', 'Potri.002G188600' => 'ptr', 'Potri.006G194000' => 'ptr', 'Potri.007G124000' => 'ptr', 'Potri.010G001500' => 'ptr', 'Potri.014G114200' => 'ptr', 'Potri.016G059600' => 'ptr', 'Potri.017G036300' => 'ptr', 'Pp3c17_15340' => 'ppa', 'Pp3c7_11260' => 'ppa', 'Pp3c7_11290' => 'ppa', 'Prupe.1G106400' => 'ppe', 'Prupe.1G189000' => 'ppe', 'Prupe.3G003900' => 'ppe', 'Prupe.7G080900' => 'ppe', 'Psat0s3307g0040' => 'psa', 'Psat0ss1196g0160' => 'psa', 'Psat1g108240' => 'psa', 'Psat3g067640' => 'psa', 'Psat3g161040' => 'psa', 'Psat4g059880' => 'psa', 'Psat6g088520' => 'psa', 'Psat6g159240' => 'psa', 'Psat6g241400' => 'psa', 'PSO017G0394' => 'pso', 'PSO063G3948' => 'pso', 'PSO170G0576' => 'pso', 'PSO210G1837' => 'pso', 'PSO210G4269' => 'pso', 'PSO339G6563' => 'pso', 'PSO357G0267' => 'pso', 'PSO384G3899' => 'pso', 'PSO541G0318' => 'pso', 'PSO675G6212' => 'pso', 'PSO675G8089' => 'pso', 'PSO761G0490' => 'pso', 'PSO832G1427' => 'pso', 'PSO832G3987' => 'pso', 'QL06p014100' => 'qlo', 'QL07p024443' => 'qlo', 'QL10p045419' => 'qlo', 'QL11p050064' => 'qlo', 'QL12p034471' => 'qlo', 'RcHm_v2.0_Chr3g0479251' => 'rch', 'RcHm_v2.0_Chr3g0486191' => 'rch', 'RcHm_v2.0_Chr3g0487491' => 'rch', 'RcHm_v2.0_Chr4g0407431' => 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000703' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000703' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000703' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 'fan', 'FAN12G3054' => 'fan', 'FAN14G2051' => 'fan', 'FAN17G0934' => 'fan', 'FAN17G3130' => 'fan', 'FAN19G0590' => 'fan', 'FAN22G1338' => 'fan', 'FAN23G0504' => 'fan', 'FAN26G2062' => 'fan', 'FAN28G0888' => 'fan', 'FvH4_1g26420' => 'fve', 'FvH4_4g11280' => 'fve', 'FvH4_4g21440' => 'fve', 'FvH4_6g21920' => 'fve', 'Glyma.02G008500' => 'gma', 'Glyma.03G146400' => 'gma', 'Glyma.03G223100' => 'gma', 'Glyma.07G234300' => 'gma', 'Glyma.09G109100' => 'gma', 'Glyma.10G009100' => 'gma', 'Glyma.10G295700' => 'gma', 'Glyma.17G039800' => 'gma', 'Glyma.19G149700' => 'gma', 'Glyma.19G220300' => 'gma', 'Glyma.20G245600' => 'gma', 'Gohir.A01G136900' => 'ghi', 'Gohir.A02G014500' => 'ghi', 'Gohir.A02G057800' => 'ghi', 'Gohir.A04G054600' => 'ghi', 'Gohir.A05G327100' => 'ghi', 'Gohir.A07G131200' => 'ghi', 'Gohir.A08G037500' => 'ghi', 'Gohir.A09G210200' => 'ghi', 'Gohir.A10G134500' => 'ghi', 'Gohir.A12G120800' => 'ghi', 'Gohir.D01G109925' => 'ghi', 'Gohir.D01G125100' => 'ghi', 'Gohir.D02G016100' => 'ghi', 'Gohir.D02G063600' => 'ghi', 'Gohir.D04G089100' => 'ghi', 'Gohir.D05G042200' => 'ghi', 'Gohir.D05G327200' => 'ghi', 'Gohir.D06G083866' => 'ghi', 'Gohir.D06G123450' => 'ghi', 'Gohir.D07G135500' => 'ghi', 'Gohir.D08G047800' => 'ghi', 'Gohir.D09G203600' => 'ghi', 'Gohir.D09G203650' => 'ghi', 'Gohir.D10G132000' => 'ghi', 'Gohir.D12G124600' => 'ghi', 'Gorai.001G073400' => 'gra', 'Gorai.001G147400' => 'gra', 'Gorai.002G155700' => 'gra', 'Gorai.004G047300' => 'gra', 'Gorai.005G019600' => 'gra', 'Gorai.005G071500' => 'gra', 'Gorai.006G227500' => 'gra', 'Gorai.008G135600' => 'gra', 'Gorai.009G351100' => 'gra', 'Gorai.011G145700' => 'gra', 'Gorai.012G099200' => 'gra', 'Gorai.013G116400' => 'gra', 'Gorai.013G161000' => 'gra', 'Gorai.013G181900' => 'gra', 'GSVIVG01013564001' => 'vvi', 'GSVIVG01017680001' => 'vvi', 'GSVIVG01028210001' => 'vvi', 'GSVIVG01033472001' => 'vvi', 'HanXRQChr01g0009401' => 'han', 'HanXRQChr02g0057811' => 'han', 'HanXRQChr05g0148331' => 'han', 'HanXRQChr06g0176151' => 'han', 'HanXRQChr07g0186721' => 'han', 'HanXRQChr10g0300601' => 'han', 'HanXRQChr10g0300611' => 'han', 'HanXRQChr11g0338501' => 'han', 'HanXRQChr11g0338511' => 'han', 'HanXRQChr11g0338531' => 'han', 'HanXRQChr13g0390071' => 'han', 'HanXRQChr15g0491341' => 'han', 'HanXRQChr15g0494791' => 'han', 'HanXRQChr17g0542811' => 'han', 'HanXRQChr17g0558351' => 'han', 'Haze_00713' => 'cav', 'Haze_00777' => 'cav', 'Haze_00779' => 'cav', 'Haze_00784' => 'cav', 'Haze_05127' => 'cav', 'Haze_20017' => 'cav', 'Hma1.2p1_0124F.1_g058230' => 'hma', 'Hma1.2p1_0408F.1_g146380' => 'hma', 'Hma1.2p1_0429F.1_g151100' => 'hma', 'Hma1.2p1_1160F.1_g262500' => 'hma', 'Hma1.2p1_1477F.1_g285920' => 'hma', 'Hma1.2p1_1478F.1_g286010' => 'hma', 'Hma1.2p1_2257F.1_g318240' => 'hma', 'HPP92_001943' => 'vpl', 'HPP92_006147' => 'vpl', 'HPP92_010874' => 'vpl', 'HPP92_011680' => 'vpl', 'HPP92_013586' => 'vpl', 'HPP92_016183' => 'vpl', 'HPP92_016184' => 'vpl', 'HPP92_016965' => 'vpl', 'HPP92_017030' => 'vpl', 'HPP92_017304' => 'vpl', 'HPP92_026733' => 'vpl', 'Hund11537' => 'sun', 'Hund12216' => 'sun', 'Hund12250' => 'sun', 'Hund14707' => 'sun', 'Hund19210' => 'sun', 'Lalb_Chr02g0144291' => 'lal', 'Lalb_Chr02g0147051' => 'lal', 'Lalb_Chr04g0259571' => 'lal', 'Lalb_Chr04g0260151' => 'lal', 'Lalb_Chr06g0164481' => 'lal', 'Lalb_Chr12g0200611' => 'lal', 'Lalb_Chr15g0077911' => 'lal', 'Lalb_Chr15g0079091' => 'lal', 'Lalb_Chr18g0048031' => 'lal', 'Lalb_Chr21g0307581' => 'lal', 'Lalb_Chr21g0309811' => 'lal', 'Lj1g0003375' => 'lja', 'Lj1g0005481' => 'lja', 'Lj2A365T87' => 'lonja', 'Lj3C232T7' => 'lonja', 'Lj3C840G6' => 'lonja', 'Lj4g0020755' => 'lja', 'Lj5g0004575' => 'lja', 'Lj5g0007259' => 'lja', 'Lj6A587T54' => 'lonja', 'Lj6A587T55' => 'lonja', 'Lj6A588T68' => 'lonja', 'Lj6A588T69' => 'lonja', 'Lj6A591G45' => 'lonja', 'Lj6A592G57' => 'lonja', 'Lj6A594G79' => 'lonja', 'Lj6A594T84' => 'lonja', 'Lj6A604G54' => 'lonja', 'Lj6A604T49' => 'lonja', 'Lj6A605T84' => 'lonja', 'Lj6A61G39' => 'lonja', 'Lj6A61T42' => 'lonja', 'Lj6A70G33' => 'lonja', 'Lj6C292T2' => 'lonja', 'Lj6C587G6' => 'lonja', 'Lj6C588G4' => 'lonja', 'Lj6C588T7' => 'lonja', 'Lj6C591T1' => 'lonja', 'Lj6C592G8' => 'lonja', 'Lj6C592G9' => 'lonja', 'Lj6C592T6' => 'lonja', 'Lj6C700T7' => 'lonja', 'Lj6P591T15' => 'lonja', 'Lju124A23T76' => 'lonja', 'Lsat_1_v5_gn_0_46480' => 'lsa', 'Lsat_1_v5_gn_1_39880' => 'lsa', 'Lsat_1_v5_gn_2_51700' => 'lsa', 'Lsat_1_v5_gn_5_165440' => 'lsa', 'Lsat_1_v5_gn_5_55640' => 'lsa', 'Lsat_1_v5_gn_6_54880' => 'lsa', 'Lsat_1_v5_gn_8_75181' => 'lsa', 'Lsat_1_v5_gn_9_25901' => 'lsa', 'Manes.01G233500' => 'mes', 'Manes.04G049100' => 'mes', 'Manes.05G010300' => 'mes', 'Manes.08G043000' => 'mes', 'Manes.09G037100' => 'mes', 'Manes.11G115900' => 'mes', 'Mapoly0051s0094' => 'mpo', 'MBI08_g33647_MAGBIO' => 'mbi', 'MBI11_g35032_MAGBIO' => 'mbi', 'MBI13_g20495_MAGBIO' => 'mbi', 'MBI18_g09630_MAGBIO' => 'mbi', 'MBI19_g17423_MAGBIO' => 'mbi', 'MBI19_g32727_MAGBIO' => 'mbi', 'MD04G1038500' => 'mdo', 'MD09G1292500' => 'mdo', 'MD12G1055000' => 'mdo', 'MD13G1141200' => 'mdo', 'MD13G1258500' => 'mdo', 'MD14G1054200' => 'mdo', 'MD16G1137300' => 'mdo', 'MD17G1283600' => 'mdo', 'Medtr1g054340' => 'mtr', 'Medtr1g086230' => 'mtr', 'Medtr1g116520' => 'mtr', 'Medtr4g123870' => 'mtr', 'Medtr7g093610' => 'mtr', 'Medtr8g014870' => 'mtr', 'MELO3C009609.2' => 'cme', 'MELO3C011622.2' => 'cme', 'MELO3C017693.2' => 'cme', 'MELO3C023605.2' => 'cme', 'MELO3C024036.2' => 'cme', 'Migut.D00023' => 'egut', 'Migut.J01854' => 'egut', 'Migut.K00029' => 'egut', 'Migut.N00007' => 'egut', 'Migut.N03114' => 'egut', 'Migut.O00204' => 'egut', 'Migut.O00859' => 'egut', 'MSTRG.15097' => 'ama', 'MSTRG.18063' => 'ama', 'MSTRG.19918' => 'ama', 'MSTRG.21744' => 'ama', 'MSTRG.21992' => 'ama', 'MSTRG.24587' => 'ama', 'MSTRG.26079' => 'ama', 'Nitab4.5_0000001g0020' => 'nta', 'Nitab4.5_0000009g0010' => 'nta', 'Nitab4.5_0000358g0010' => 'nta', 'Nitab4.5_0000698g0090' => 'nta', 'Nitab4.5_0000745g0140' => 'nta', 'Nitab4.5_0000895g0200' => 'nta', 'Nitab4.5_0000911g0010' => 'nta', 'Nitab4.5_0000978g0090' => 'nta', 'Nitab4.5_0001049g0070' => 'nta', 'Nitab4.5_0001079g0050' => 'nta', 'Nitab4.5_0001440g0070' => 'nta', 'Nitab4.5_0002466g0020' => 'nta', 'Nitab4.5_0004665g0030' => 'nta', 'Nitab4.5_0004962g0040' => 'nta', 'Nitab4.5_0007274g0040' => 'nta', 'Nitab4.5_0008086g0010' => 'nta', 'Nn2g15731' => 'nnu', 'Nn3g20224' => 'nnu', 'Nn3g21900' => 'nnu', 'Nn4g25401' => 'nnu', 'Nn7g35975' => 'nnu', 'Nn7g37669' => 'nnu', 'Oeu007529.2' => 'oeu', 'Oeu029566.1' => 'oeu', 'Oeu038066.1' => 'oeu', 'Oeu046721.1' => 'oeu', 'Oeu050350.1' => 'oeu', 'Oeu052152.2' => 'oeu', 'Oeu061588.2' => 'oeu', 'Oeu063570.1' => 'oeu', 'Os01g0310800' => 'osa', 'Os01g0323100' => 'osa', 'Os01g0899000' => 'osa', 'Os02g0565500' => 'osa', 'Os03g0226300' => 'osa', 'Os03g0719850' => 'osa', 'Os03g0844100' => 'osa', 'Os04g0490500' => 'osa', 'Os05g0135800' => 'osa', 'Os09g0513600' => 'osa', 'Peaxi162Scf00003g00461' => 'pax', 'Peaxi162Scf00076g00923' => 'pax', 'Peaxi162Scf00126g01128' => 'pax', 'Peaxi162Scf00164g00412' => 'pax', 'Peaxi162Scf00249g00123' => 'pax', 'Peaxi162Scf00258g00918' => 'pax', 'Peaxi162Scf00323g00815' => 'pax', 'Peaxi162Scf00586g00057' => 'pax', 'Peaxi162Scf00668g00445' => 'pax', 'PGR031G2951' => 'pgr', 'PGR042G0692' => 'pgr', 'PGR042G3468' => 'pgr', 'PGR083G0793' => 'pgr', 'PGR142G0588' => 'pgr', 'PGR142G3447' => 'pgr', 'PGSC0003DMG400004594' => 'stu', 'PGSC0003DMG400004687' => 'stu', 'PGSC0003DMG400011422' => 'stu', 'PGSC0003DMG400013232' => 'stu', 'PGSC0003DMG400017167' => 'stu', 'PGSC0003DMG400023704' => 'stu', 'PGSC0003DMG400026326' => 'stu', 'PGSC0003DMG400027204' => 'stu', 'Phvul.001G216800' => 'pvu', 'Phvul.003G120800' => 'pvu', 'Phvul.007G004200' => 'pvu', 'Phvul.007G210500' => 'pvu', 'Phvul.007G261200' => 'pvu', 'Potri.002G188600' => 'ptr', 'Potri.006G194000' => 'ptr', 'Potri.007G124000' => 'ptr', 'Potri.010G001500' => 'ptr', 'Potri.014G114200' => 'ptr', 'Potri.016G059600' => 'ptr', 'Potri.017G036300' => 'ptr', 'Pp3c17_15340' => 'ppa', 'Pp3c7_11260' => 'ppa', 'Pp3c7_11290' => 'ppa', 'Prupe.1G106400' => 'ppe', 'Prupe.1G189000' => 'ppe', 'Prupe.3G003900' => 'ppe', 'Prupe.7G080900' => 'ppe', 'Psat0s3307g0040' => 'psa', 'Psat0ss1196g0160' => 'psa', 'Psat1g108240' => 'psa', 'Psat3g067640' => 'psa', 'Psat3g161040' => 'psa', 'Psat4g059880' => 'psa', 'Psat6g088520' => 'psa', 'Psat6g159240' => 'psa', 'Psat6g241400' => 'psa', 'PSO017G0394' => 'pso', 'PSO063G3948' => 'pso', 'PSO170G0576' => 'pso', 'PSO210G1837' => 'pso', 'PSO210G4269' => 'pso', 'PSO339G6563' => 'pso', 'PSO357G0267' => 'pso', 'PSO384G3899' => 'pso', 'PSO541G0318' => 'pso', 'PSO675G6212' => 'pso', 'PSO675G8089' => 'pso', 'PSO761G0490' => 'pso', 'PSO832G1427' => 'pso', 'PSO832G3987' => 'pso', 'QL06p014100' => 'qlo', 'QL07p024443' => 'qlo', 'QL10p045419' => 'qlo', 'QL11p050064' => 'qlo', 'QL12p034471' => 'qlo', 'RcHm_v2.0_Chr3g0479251' => 'rch', 'RcHm_v2.0_Chr3g0486191' => 'rch', 'RcHm_v2.0_Chr3g0487491' => 'rch', 'RcHm_v2.0_Chr4g0407431' => 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000703', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000703' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 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=> 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000703' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000703' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000703' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 'fan', 'FAN12G3054' => 'fan', 'FAN14G2051' => 'fan', 'FAN17G0934' => 'fan', 'FAN17G3130' => 'fan', 'FAN19G0590' => 'fan', 'FAN22G1338' => 'fan', 'FAN23G0504' => 'fan', 'FAN26G2062' => 'fan', 'FAN28G0888' => 'fan', 'FvH4_1g26420' => 'fve', 'FvH4_4g11280' => 'fve', 'FvH4_4g21440' => 'fve', 'FvH4_6g21920' => 'fve', 'Glyma.02G008500' => 'gma', 'Glyma.03G146400' => 'gma', 'Glyma.03G223100' => 'gma', 'Glyma.07G234300' => 'gma', 'Glyma.09G109100' => 'gma', 'Glyma.10G009100' => 'gma', 'Glyma.10G295700' => 'gma', 'Glyma.17G039800' => 'gma', 'Glyma.19G149700' => 'gma', 'Glyma.19G220300' => 'gma', 'Glyma.20G245600' => 'gma', 'Gohir.A01G136900' => 'ghi', 'Gohir.A02G014500' => 'ghi', 'Gohir.A02G057800' => 'ghi', 'Gohir.A04G054600' => 'ghi', 'Gohir.A05G327100' => 'ghi', 'Gohir.A07G131200' => 'ghi', 'Gohir.A08G037500' => 'ghi', 'Gohir.A09G210200' => 'ghi', 'Gohir.A10G134500' => 'ghi', 'Gohir.A12G120800' => 'ghi', 'Gohir.D01G109925' => 'ghi', 'Gohir.D01G125100' => 'ghi', 'Gohir.D02G016100' => 'ghi', 'Gohir.D02G063600' => 'ghi', 'Gohir.D04G089100' => 'ghi', 'Gohir.D05G042200' => 'ghi', 'Gohir.D05G327200' => 'ghi', 'Gohir.D06G083866' => 'ghi', 'Gohir.D06G123450' => 'ghi', 'Gohir.D07G135500' => 'ghi', 'Gohir.D08G047800' => 'ghi', 'Gohir.D09G203600' => 'ghi', 'Gohir.D09G203650' => 'ghi', 'Gohir.D10G132000' => 'ghi', 'Gohir.D12G124600' => 'ghi', 'Gorai.001G073400' => 'gra', 'Gorai.001G147400' => 'gra', 'Gorai.002G155700' => 'gra', 'Gorai.004G047300' => 'gra', 'Gorai.005G019600' => 'gra', 'Gorai.005G071500' => 'gra', 'Gorai.006G227500' => 'gra', 'Gorai.008G135600' => 'gra', 'Gorai.009G351100' => 'gra', 'Gorai.011G145700' => 'gra', 'Gorai.012G099200' => 'gra', 'Gorai.013G116400' => 'gra', 'Gorai.013G161000' => 'gra', 'Gorai.013G181900' => 'gra', 'GSVIVG01013564001' => 'vvi', 'GSVIVG01017680001' => 'vvi', 'GSVIVG01028210001' => 'vvi', 'GSVIVG01033472001' => 'vvi', 'HanXRQChr01g0009401' => 'han', 'HanXRQChr02g0057811' => 'han', 'HanXRQChr05g0148331' => 'han', 'HanXRQChr06g0176151' => 'han', 'HanXRQChr07g0186721' => 'han', 'HanXRQChr10g0300601' => 'han', 'HanXRQChr10g0300611' => 'han', 'HanXRQChr11g0338501' => 'han', 'HanXRQChr11g0338511' => 'han', 'HanXRQChr11g0338531' => 'han', 'HanXRQChr13g0390071' => 'han', 'HanXRQChr15g0491341' => 'han', 'HanXRQChr15g0494791' => 'han', 'HanXRQChr17g0542811' => 'han', 'HanXRQChr17g0558351' => 'han', 'Haze_00713' => 'cav', 'Haze_00777' => 'cav', 'Haze_00779' => 'cav', 'Haze_00784' => 'cav', 'Haze_05127' => 'cav', 'Haze_20017' => 'cav', 'Hma1.2p1_0124F.1_g058230' => 'hma', 'Hma1.2p1_0408F.1_g146380' => 'hma', 'Hma1.2p1_0429F.1_g151100' => 'hma', 'Hma1.2p1_1160F.1_g262500' => 'hma', 'Hma1.2p1_1477F.1_g285920' => 'hma', 'Hma1.2p1_1478F.1_g286010' => 'hma', 'Hma1.2p1_2257F.1_g318240' => 'hma', 'HPP92_001943' => 'vpl', 'HPP92_006147' => 'vpl', 'HPP92_010874' => 'vpl', 'HPP92_011680' => 'vpl', 'HPP92_013586' => 'vpl', 'HPP92_016183' => 'vpl', 'HPP92_016184' => 'vpl', 'HPP92_016965' => 'vpl', 'HPP92_017030' => 'vpl', 'HPP92_017304' => 'vpl', 'HPP92_026733' => 'vpl', 'Hund11537' => 'sun', 'Hund12216' => 'sun', 'Hund12250' => 'sun', 'Hund14707' => 'sun', 'Hund19210' => 'sun', 'Lalb_Chr02g0144291' => 'lal', 'Lalb_Chr02g0147051' => 'lal', 'Lalb_Chr04g0259571' => 'lal', 'Lalb_Chr04g0260151' => 'lal', 'Lalb_Chr06g0164481' => 'lal', 'Lalb_Chr12g0200611' => 'lal', 'Lalb_Chr15g0077911' => 'lal', 'Lalb_Chr15g0079091' => 'lal', 'Lalb_Chr18g0048031' => 'lal', 'Lalb_Chr21g0307581' => 'lal', 'Lalb_Chr21g0309811' => 'lal', 'Lj1g0003375' => 'lja', 'Lj1g0005481' => 'lja', 'Lj2A365T87' => 'lonja', 'Lj3C232T7' => 'lonja', 'Lj3C840G6' => 'lonja', 'Lj4g0020755' => 'lja', 'Lj5g0004575' => 'lja', 'Lj5g0007259' => 'lja', 'Lj6A587T54' => 'lonja', 'Lj6A587T55' => 'lonja', 'Lj6A588T68' => 'lonja', 'Lj6A588T69' => 'lonja', 'Lj6A591G45' => 'lonja', 'Lj6A592G57' => 'lonja', 'Lj6A594G79' => 'lonja', 'Lj6A594T84' => 'lonja', 'Lj6A604G54' => 'lonja', 'Lj6A604T49' => 'lonja', 'Lj6A605T84' => 'lonja', 'Lj6A61G39' => 'lonja', 'Lj6A61T42' => 'lonja', 'Lj6A70G33' => 'lonja', 'Lj6C292T2' => 'lonja', 'Lj6C587G6' => 'lonja', 'Lj6C588G4' => 'lonja', 'Lj6C588T7' => 'lonja', 'Lj6C591T1' => 'lonja', 'Lj6C592G8' => 'lonja', 'Lj6C592G9' => 'lonja', 'Lj6C592T6' => 'lonja', 'Lj6C700T7' => 'lonja', 'Lj6P591T15' => 'lonja', 'Lju124A23T76' => 'lonja', 'Lsat_1_v5_gn_0_46480' => 'lsa', 'Lsat_1_v5_gn_1_39880' => 'lsa', 'Lsat_1_v5_gn_2_51700' => 'lsa', 'Lsat_1_v5_gn_5_165440' => 'lsa', 'Lsat_1_v5_gn_5_55640' => 'lsa', 'Lsat_1_v5_gn_6_54880' => 'lsa', 'Lsat_1_v5_gn_8_75181' => 'lsa', 'Lsat_1_v5_gn_9_25901' => 'lsa', 'Manes.01G233500' => 'mes', 'Manes.04G049100' => 'mes', 'Manes.05G010300' => 'mes', 'Manes.08G043000' => 'mes', 'Manes.09G037100' => 'mes', 'Manes.11G115900' => 'mes', 'Mapoly0051s0094' => 'mpo', 'MBI08_g33647_MAGBIO' => 'mbi', 'MBI11_g35032_MAGBIO' => 'mbi', 'MBI13_g20495_MAGBIO' => 'mbi', 'MBI18_g09630_MAGBIO' => 'mbi', 'MBI19_g17423_MAGBIO' => 'mbi', 'MBI19_g32727_MAGBIO' => 'mbi', 'MD04G1038500' => 'mdo', 'MD09G1292500' => 'mdo', 'MD12G1055000' => 'mdo', 'MD13G1141200' => 'mdo', 'MD13G1258500' => 'mdo', 'MD14G1054200' => 'mdo', 'MD16G1137300' => 'mdo', 'MD17G1283600' => 'mdo', 'Medtr1g054340' => 'mtr', 'Medtr1g086230' => 'mtr', 'Medtr1g116520' => 'mtr', 'Medtr4g123870' => 'mtr', 'Medtr7g093610' => 'mtr', 'Medtr8g014870' => 'mtr', 'MELO3C009609.2' => 'cme', 'MELO3C011622.2' => 'cme', 'MELO3C017693.2' => 'cme', 'MELO3C023605.2' => 'cme', 'MELO3C024036.2' => 'cme', 'Migut.D00023' => 'egut', 'Migut.J01854' => 'egut', 'Migut.K00029' => 'egut', 'Migut.N00007' => 'egut', 'Migut.N03114' => 'egut', 'Migut.O00204' => 'egut', 'Migut.O00859' => 'egut', 'MSTRG.15097' => 'ama', 'MSTRG.18063' => 'ama', 'MSTRG.19918' => 'ama', 'MSTRG.21744' => 'ama', 'MSTRG.21992' => 'ama', 'MSTRG.24587' => 'ama', 'MSTRG.26079' => 'ama', 'Nitab4.5_0000001g0020' => 'nta', 'Nitab4.5_0000009g0010' => 'nta', 'Nitab4.5_0000358g0010' => 'nta', 'Nitab4.5_0000698g0090' => 'nta', 'Nitab4.5_0000745g0140' => 'nta', 'Nitab4.5_0000895g0200' => 'nta', 'Nitab4.5_0000911g0010' => 'nta', 'Nitab4.5_0000978g0090' => 'nta', 'Nitab4.5_0001049g0070' => 'nta', 'Nitab4.5_0001079g0050' => 'nta', 'Nitab4.5_0001440g0070' => 'nta', 'Nitab4.5_0002466g0020' => 'nta', 'Nitab4.5_0004665g0030' => 'nta', 'Nitab4.5_0004962g0040' => 'nta', 'Nitab4.5_0007274g0040' => 'nta', 'Nitab4.5_0008086g0010' => 'nta', 'Nn2g15731' => 'nnu', 'Nn3g20224' => 'nnu', 'Nn3g21900' => 'nnu', 'Nn4g25401' => 'nnu', 'Nn7g35975' => 'nnu', 'Nn7g37669' => 'nnu', 'Oeu007529.2' => 'oeu', 'Oeu029566.1' => 'oeu', 'Oeu038066.1' => 'oeu', 'Oeu046721.1' => 'oeu', 'Oeu050350.1' => 'oeu', 'Oeu052152.2' => 'oeu', 'Oeu061588.2' => 'oeu', 'Oeu063570.1' => 'oeu', 'Os01g0310800' => 'osa', 'Os01g0323100' => 'osa', 'Os01g0899000' => 'osa', 'Os02g0565500' => 'osa', 'Os03g0226300' => 'osa', 'Os03g0719850' => 'osa', 'Os03g0844100' => 'osa', 'Os04g0490500' => 'osa', 'Os05g0135800' => 'osa', 'Os09g0513600' => 'osa', 'Peaxi162Scf00003g00461' => 'pax', 'Peaxi162Scf00076g00923' => 'pax', 'Peaxi162Scf00126g01128' => 'pax', 'Peaxi162Scf00164g00412' => 'pax', 'Peaxi162Scf00249g00123' => 'pax', 'Peaxi162Scf00258g00918' => 'pax', 'Peaxi162Scf00323g00815' => 'pax', 'Peaxi162Scf00586g00057' => 'pax', 'Peaxi162Scf00668g00445' => 'pax', 'PGR031G2951' => 'pgr', 'PGR042G0692' => 'pgr', 'PGR042G3468' => 'pgr', 'PGR083G0793' => 'pgr', 'PGR142G0588' => 'pgr', 'PGR142G3447' => 'pgr', 'PGSC0003DMG400004594' => 'stu', 'PGSC0003DMG400004687' => 'stu', 'PGSC0003DMG400011422' => 'stu', 'PGSC0003DMG400013232' => 'stu', 'PGSC0003DMG400017167' => 'stu', 'PGSC0003DMG400023704' => 'stu', 'PGSC0003DMG400026326' => 'stu', 'PGSC0003DMG400027204' => 'stu', 'Phvul.001G216800' => 'pvu', 'Phvul.003G120800' => 'pvu', 'Phvul.007G004200' => 'pvu', 'Phvul.007G210500' => 'pvu', 'Phvul.007G261200' => 'pvu', 'Potri.002G188600' => 'ptr', 'Potri.006G194000' => 'ptr', 'Potri.007G124000' => 'ptr', 'Potri.010G001500' => 'ptr', 'Potri.014G114200' => 'ptr', 'Potri.016G059600' => 'ptr', 'Potri.017G036300' => 'ptr', 'Pp3c17_15340' => 'ppa', 'Pp3c7_11260' => 'ppa', 'Pp3c7_11290' => 'ppa', 'Prupe.1G106400' => 'ppe', 'Prupe.1G189000' => 'ppe', 'Prupe.3G003900' => 'ppe', 'Prupe.7G080900' => 'ppe', 'Psat0s3307g0040' => 'psa', 'Psat0ss1196g0160' => 'psa', 'Psat1g108240' => 'psa', 'Psat3g067640' => 'psa', 'Psat3g161040' => 'psa', 'Psat4g059880' => 'psa', 'Psat6g088520' => 'psa', 'Psat6g159240' => 'psa', 'Psat6g241400' => 'psa', 'PSO017G0394' => 'pso', 'PSO063G3948' => 'pso', 'PSO170G0576' => 'pso', 'PSO210G1837' => 'pso', 'PSO210G4269' => 'pso', 'PSO339G6563' => 'pso', 'PSO357G0267' => 'pso', 'PSO384G3899' => 'pso', 'PSO541G0318' => 'pso', 'PSO675G6212' => 'pso', 'PSO675G8089' => 'pso', 'PSO761G0490' => 'pso', 'PSO832G1427' => 'pso', 'PSO832G3987' => 'pso', 'QL06p014100' => 'qlo', 'QL07p024443' => 'qlo', 'QL10p045419' => 'qlo', 'QL11p050064' => 'qlo', 'QL12p034471' => 'qlo', 'RcHm_v2.0_Chr3g0479251' => 'rch', 'RcHm_v2.0_Chr3g0486191' => 'rch', 'RcHm_v2.0_Chr3g0487491' => 'rch', 'RcHm_v2.0_Chr4g0407431' => 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000703', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000703' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000703', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '815', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' ) ), 'genes' => array( 'A01p36940' => 'bna', 'A01p36960' => 'bna', 'A03p17180' => 'bna', 'A03p40180' => 'bna', 'A04p02200' => 'bna', 'A04p22060' => 'bna', 'A04p23450' => 'bna', 'A04p26540' => 'bna', 'A04p31950' => 'bna', 'A04p32510' => 'bna', 'A05p00740' => 'bna', 'A05p02680' => 'bna', 'A05p03680' => 'bna', 'A05p14810' => 'bna', 'A05p32370' => 'bna', 'A07p24620' => 'bna', 'A08p05060' => 'bna', 'A08p05100' => 'bna', 'A09p51620' => 'bna', 'A09p66840' => 'bna', 'A10p05280' => 'bna', 'Aa31LG10G13680' => 'aar', 'Aa31LG10G5540' => 'aar', 'Aa31LG1G24160' => 'aar', 'Aa31LG1G25030' => 'aar', 'Aa31LG1G28400' => 'aar', 'Aa31LG1G7740' => 'aar', 'Aa31LG5G6100' => 'aar', 'Aa31LG8G4350' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.687' => 'aag', 'Actinidia01058' => 'ach', 'Actinidia14371' => 'ach', 'Actinidia17283' => 'ach', 'Actinidia22056' => 'ach', 'Actinidia22057' => 'ach', 'Actinidia32409' => 'ach', 'Actinidia33016' => 'ach', 'Actinidia35904' => 'ach', 'Actinidia38591' => 'ach', 'Ah.02g116360' => 'amhyb', 'Ah.04g152810' => 'amhyb', 'Ah.12g057820' => 'amhyb', 'AL1G16710' => 'aly', 'AL1G54800' => 'aly', 'AL3G30490' => 'aly', 'AL4G25630' => 'aly', 'AL4G25640' => 'aly', 'AL4G40330' => 'aly', 'AL4G41880' => 'aly', 'AL4G46560' => 'aly', 'AL5G41210' => 'aly', 'AL5G44960' => 'aly', 'Aqoxy1G00148' => 'aox', 'Aqoxy2G02533' => 'aox', 'Aqoxy2G04116' => 'aox', 'Aqoxy5G02787' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8420TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A192VQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5E51Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFQF1J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BL385Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DH6LBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3KGDS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L6WGFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TA1J94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQ37Z0' => 'arhy', 'AT1G06700' => 'ath', 'AT1G48210' => 'ath', 'AT1G48220' => 'ath', 'AT2G30730' => 'ath', 'AT2G30740' => 'ath', 'AT2G41970' => 'ath', 'AT2G43230' => 'ath', 'AT2G47060' => 'ath', 'AT3G17410' => 'ath', 'AT3G59350' => 'ath', 'AT3G62220' => 'ath', 'ATR0568G019' => 'atr', 'ATR0568G164' => 'atr', 'ATR0598G221' => 'atr', 'ATR0743G055' => 'atr', 'ATR0796G222' => 'atr', 'Atru.chr3.1615' => 'acertr', 'Atru.chr4.3139' => 'acertr', 'Atru.chr8.1153' => 'acertr', 'AUR62002562' => 'cqu', 'AUR62002620' => 'cqu', 'AUR62006481' => 'cqu', 'AUR62010570' => 'cqu', 'AUR62010571' => 'cqu', 'AUR62012003' => 'cqu', 'AUR62015336' => 'cqu', 'AUR62017317' => 'cqu', 'AUR62017318' => 'cqu', 'AUR62022779' => 'cqu', 'AUR62029981' => 'cqu', 'AUR62030036' => 'cqu', 'BcaB01g03191' => 'bca', 'BcaB01g03431' => 'bca', 'BcaB01g04082' => 'bca', 'BcaB02g07473' => 'bca', 'BcaB02g08120' => 'bca', 'BcaB02g08226' => 'bca', 'BcaB02g10339' => 'bca', 'BcaB04g17457' => 'bca', 'BcaB04g18941' => 'bca', 'BcaB04g20845' => 'bca', 'BcaB06g28039' => 'bca', 'BcaB06g28795' => 'bca', 'BcaB06g29221' => 'bca', 'BcaC01g03765' => 'bca', 'BcaC01g05315' => 'bca', 'BcaC01g06013' => 'bca', 'BcaC02g07269' => 'bca', 'BcaC02g09026' => 'bca', 'BcaC02g10052' => 'bca', 'BcaC02g11163' => 'bca', 'BcaC02g12453' => 'bca', 'BcaC04g20353' => 'bca', 'BcaC05g28793' => 'bca', 'BcaC07g37164' => 'bca', 'BcaC07g40277' => 'bca', 'BcaC07g40461' => 'bca', 'BcaC07g42053' => 'bca', 'BcaC08g44980' => 'bca', 'BcaC09g48696' => 'bca', 'BcaC09g48698' => 'bca', 'BcaNung05934' => 'bca', 'BcaNung07048' => 'bca', 'BcaNung07371' => 'bca', 'BolC1t04656H' => 'bol', 'BolC3t14403H' => 'bol', 'BolC3t15174H' => 'bol', 'BolC3t15428H' => 'bol', 'BolC3t17162H' => 'bol', 'BolC4t21728H' => 'bol', 'BolC4t21958H' => 'bol', 'BolC4t22065H' => 'bol', 'BolC4t23519H' => 'bol', 'BolC4t24910H' => 'bol', 'BolC4t27484H' => 'bol', 'BolC4t27865H' => 'bol', 'BolC4t28444H' => 'bol', 'BolC4t28524H' => 'bol', 'BolC5t29260H' => 'bol', 'BolC5t33642H' => 'bol', 'BolC6t37775H' => 'bol', 'BolC8t47351H' => 'bol', 'BolC8t52633H' => 'bol', 'BolC9t57333H' => 'bol', 'BraA01t03753Z' => 'bra', 'BraA01t03756Z' => 'bra', 'BraA03t10992Z' => 'bra', 'BraA03t11567Z' => 'bra', 'BraA03t13168Z' => 'bra', 'BraA04t15949Z' => 'bra', 'BraA04t17872Z' => 'bra', 'BraA04t18158Z' => 'bra', 'BraA04t18653Z' => 'bra', 'BraA04t18715Z' => 'bra', 'BraA05t19078Z' => 'bra', 'BraA05t19260Z' => 'bra', 'BraA05t19353Z' => 'bra', 'BraA05t19354Z' => 'bra', 'BraA05t20409Z' => 'bra', 'BraA05t22064Z' => 'bra', 'BraA07t30107Z' => 'bra', 'BraA08t32528Z' => 'bra', 'BraA09t40602Z' => 'bra', 'BraA09t42021Z' => 'bra', 'BraA10t42793Z' => 'bra', 'C01p46830' => 'bna', 'C01p46850' => 'bna', 'C03p20280' => 'bna', 'C03p28040' => 'bna', 'C03p48800' => 'bna', 'C04p00900' => 'bna', 'C04p03200' => 'bna', 'C04p04290' => 'bna', 'C04p19820' => 'bna', 'C04p33460' => 'bna', 'C04p59760' => 'bna', 'C04p63960' => 'bna', 'C04p69420' => 'bna', 'C04p70200' => 'bna', 'C05p04880' => 'bna', 'C05p49020' => 'bna', 'C06p26080' => 'bna', 'C08p05350' => 'bna', 'C08p34390' => 'bna', 'C08p51060' => 'bna', 'C09p44600' => 'bna', 'CAN.G128.52' => 'can', 'CAN.G1634.9' => 'can', 'CAN.G19.1' => 'can', 'CAN.G305.39' => 'can', 'CAN.G484.115' => 'can', 'CAN.G484.87' => 'can', 'CAN.G710.66' => 'can', 'CAN.G793.47' => 'can', 'CAN.G960.15' => 'can', 'CANSAT25G0022' => 'cansat', 'CANSAT64G1201' => 'cansat', 'CANSAT78G1919' => 'cansat', 'CANSAT78G2001' => 'cansat', 'CARHR006380' => 'chi', 'CARHR037840' => 'chi', 'CARHR092730' => 'chi', 'CARHR124230' => 'chi', 'CARHR137090' => 'chi', 'CARHR138300' => 'chi', 'CARHR142420' => 'chi', 'CARHR169730' => 'chi', 'CARHR172560' => 'chi', 'Carub.0001s0603' => 'cru', 'Carub.0001s3730' => 'cru', 'Carub.0001s3732' => 'cru', 'Carub.0001s3736' => 'cru', 'Carub.0003s1713' => 'cru', 'Carub.0004s1191' => 'cru', 'Carub.0004s1192' => 'cru', 'Carub.0004s2430' => 'cru', 'Carub.0004s2569' => 'cru', 'Carub.0004s2980' => 'cru', 'Carub.0005s2608' => 'cru', 'Carub.0005s2894' => 'cru', 'Ca_06437_v3' => 'car', 'Ca_07063_v3' => 'car', 'Ca_08537_v3' => 'car', 'Ca_09184_v3' => 'car', 'Ca_09600_v3' => 'car', 'Ca_10247_v3' => 'car', 'Ca_11398_v3' => 'car', 'Ca_11401_v3' => 'car', 'Ca_12037_v3' => 'car', 'Ca_12041_v3' => 'car', 'Ca_21382_v3' => 'car', 'Ca_22653_v3' => 'car', 'Ca_24313_v3' => 'car', 'Ca_29594_v3' => 'car', 'Ca_30514_v3' => 'car', 'CBR_g10787' => 'cbr', 'CBR_g22097' => 'cbr', 'CBR_g22098' => 'cbr', 'CBR_g22122' => 'cbr', 'CBR_g23621' => 'cbr', 'CBR_g45444' => 'cbr', 'Cc00_g20870' => 'ccan', 'Cc00_g29050' => 'ccan', 'Cc01_g21850' => 'ccan', 'Cc03_g00200' => 'ccan', 'Cc03_g13050' => 'ccan', 'Cc03_g13060' => 'ccan', 'Cc06_g15650' => 'ccan', 'CDE01G0524' => 'cde', 'CDE04G0919' => 'cde', 'CDE04G1127' => 'cde', 'CDE04G2899' => 'cde', 'CDE05G3026' => 'cde', 'CDE06G2161' => 'cde', 'CDE08G0145' => 'cde', 'CDE11G0259' => 'cde', 'Cfa004890' => 'cfa', 'Cfa015722' => 'cfa', 'Cfa015781' => 'cfa', 'Cfa020145' => 'cfa', 'Ciclev10005284m.g' => 'ccl', 'Ciclev10013472m.g' => 'ccl', 'Ciclev10020458m.g' => 'ccl', 'Ciclev10020776m.g' => 'ccl', 'Ciclev10033762m.g' => 'ccl', 'CiPaw.01G103500' => 'cil', 'CiPaw.01G130100' => 'cil', 'CiPaw.02G056600' => 'cil', 'CiPaw.02G070100' => 'cil', 'CiPaw.07G124000' => 'cil', 'CiPaw.08G084200' => 'cil', 'CiPaw.09G028600' => 'cil', 'CiPaw.10G025300' => 'cil', 'ClCG07G015860' => 'cla', 'ClCG08G004280' => 'cla', 'ClCG09G004620' => 'cla', 'ClCG10G011840' => 'cla', 'ClCG10G017670' => 'cla', 'COL.COLO4_13357' => 'col', 'COL.COLO4_23148' => 'col', 'COL.COLO4_24386' => 'col', 'COL.COLO4_29356' => 'col', 'Cpa.g.c39171.1' => 'cpa', 'Cpa.g.c39171.2' => 'cpa', 'Cpa.g.sc146.31' => 'cpa', 'Cpa.g.sc519.5' => 'cpa', 'Cpa.g.sc85.48' => 'cpa', 'CsaV3_3G031530' => 'csa', 'CsaV3_3G038640' => 'csa', 'CsaV3_4G003580' => 'csa', 'CsaV3_4G003590' => 'csa', 'CsaV3_6G003730' => 'csa', 'CsaV3_7G030510' => 'csa', 'CSS0000426' => 'camsi', 'CSS0037634' => 'camsi', 'CSS0046342' => 'camsi', 'DCAR_001127' => 'dca', 'DCAR_005542' => 'dca', 'DCAR_005543' => 'dca', 'DCAR_013170' => 'dca', 'DCAR_019777' => 'dca', 'DCAR_019855' => 'dca', 'DCAR_023398' => 'dca', 'DCAR_023917' => 'dca', 'DCAR_030425' => 'dca', 'Dinv12093' => 'din', 'Dinv18028' => 'din', 'Dinv22687' => 'din', 'Dinv44219' => 'din', 'Duzib093G1876' => 'dzi', 'Duzib106G0176' => 'dzi', 'Duzib128G0353' => 'dzi', 'Duzib133G1283' => 'dzi', 'Duzib138G0547' => 'dzi', 'Duzib151G1006' => 'dzi', 'Duzib211G0095' => 'dzi', 'Duzib212G0710' => 'dzi', 'Duzib268G0925' => 'dzi', 'ECA233G5693' => 'eca', 'ECA236G2923' => 'eca', 'ECA238G1200' => 'eca', 'ECA238G3718' => 'eca', 'ECA246G3577' => 'eca', 'ECA248G3126' => 'eca', 'EL10Ac3g06263' => 'bvu', 'EL10Ac3g06312' => 'bvu', 'EL10Ac3g06888' => 'bvu', 'EL10Ac5g12707' => 'bvu', 'EL10Ac6g14963' => 'bvu', 'EL10Ac8g19993' => 'bvu', 'Eucgr.A00053' => 'egr', 'Eucgr.A00250' => 'egr', 'Eucgr.A01018' => 'egr', 'Eucgr.A02469' => 'egr', 'Eucgr.H00423' => 'egr', 'Eucgr.K01851' => 'egr', 'FAN02G4547' => 'fan', 'FAN05G4934' => 'fan', 'FAN07G1900' => 'fan', 'FAN07G2080' => 'fan', 'FAN09G1200' => 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=> 'rch', 'RcHm_v2.0_Chr4g0427371' => 'rch', 'RcHm_v2.0_Chr5g0052601' => 'rch', 'Rhsim02G0075300' => 'rsi', 'Rhsim04G0094800' => 'rsi', 'Rhsim04G0247700' => 'rsi', 'Rhsim09G0031700' => 'rsi', 'Rhsim13G0000200' => 'rsi', 'Rhsim13G0000400' => 'rsi', 'Sabra02G0166700' => 'sbr', 'Sabra07G0100400' => 'sbr', 'Sabra10G0001200' => 'sbr', 'Sabra14G0084300' => 'sbr', 'Sabra16G0062500' => 'sbr', 'SalBow1G2529' => 'sbo', 'SalBow5G2139' => 'sbo', 'SalBow6G0843' => 'sbo', 'SalBow6G2187' => 'sbo', 'SalBow6G7228' => 'sbo', 'Sc13g0002380' => 'sci', 'Sc13g0007470' => 'sci', 'Sc17g0000120' => 'sci', 'Sc19g0006080' => 'sci', 'Sc25g0001770' => 'sci', 'Sed0002512' => 'sed', 'Sed0003730' => 'sed', 'Sed0006072' => 'sed', 'Sed0006206' => 'sed', 'Sed0006611' => 'sed', 'Sed0006737' => 'sed', 'Sed0012722' => 'sed', 'Sed0015038' => 'sed', 'Sed0017783' => 'sed', 'Sed0019982' => 'sed', 'SEGI_09498' => 'sgi', 'SEGI_18615' => 'sgi', 'SEGI_24684' => 'sgi', 'SEGI_27123' => 'sgi', 'SEGI_32228' => 'sgi', 'SEGI_34978' => 'sgi', 'SEGI_41485' => 'sgi', 'SGA_v2.0_scaffold1958G54060' => 'sas', 'SGA_v2.0_scaffold227G43202' => 'sas', 'SGA_v2.0_scaffold31G12572' => 'sas', 'SGA_v2.0_scaffold406G51055' => 'sas', 'SGA_v2.0_scaffold449G51798' => 'sas', 'SGA_v2.0_scaffold80G25684' => 'sas', 'SHI30082' => 'shi', 'SMO114G0036' => 'smo', 'SMO143G0005' => 'smo', 'SMO166G0044' => 'smo', 'SMO358G0069' => 'smo', 'Solyc03g059080.3' => 'sly', 'Solyc05g053230.3' => 'sly', 'Solyc09g090210.3' => 'sly', 'Solyc10g078940.2' => 'sly', 'Solyc10g080580.1' => 'sly', 'Solyc12g098820.2' => 'sly', 'Solyc12g098980.2' => 'sly', 'Sopen03g013240' => 'spe', 'Sopen05g031740' => 'spe', 'Sopen09g033120' => 'spe', 'Sopen10g029570' => 'spe', 'Sopen10g031120' => 'spe', 'Sopen12g033560' => 'spe', 'Sopen12g033720' => 'spe', 'Sp1g05430' => 'spa', 'Sp1g35180' => 'spa', 'Sp3g15580' => 'spa', 'Sp4g13250' => 'spa', 'Sp4g24240' => 'spa', 'Sp4g25340' => 'spa', 'Sp4g29050' => 'spa', 'Sp5g01170' => 'spa', 'TAR362G1009' => 'tar', 'TAR365G0053' => 'tar', 'TAR369G0918' => 'tar', 'TAR633G1454' => 'tar', 'TAR636G1055' => 'tar', 'THA.LOC104800812' => 'tha', 'THA.LOC104802126' => 'tha', 'THA.LOC104802299' => 'tha', 'THA.LOC104803588' => 'tha', 'THA.LOC104803602' => 'tha', 'THA.LOC104807842' => 'tha', 'THA.LOC104821810' => 'tha', 'THA.LOC104824481' => 'tha', 'THA.LOC104826249' => 'tha', 'THA.LOC104827652' => 'tha', 'Thecc.01G323300' => 'tca', 'Thecc.04G184100' => 'tca', 'Thecc.04G312000' => 'tca', 'Thecc.05G174700' => 'tca', 'Thhalv10001465m.g' => 'esa', 'Thhalv10001469m.g' => 'esa', 'Thhalv10006024m.g' => 'esa', 'Thhalv10006059m.g' => 'esa', 'Thhalv10007987m.g' => 'esa', 'Thhalv10011595m.g' => 'esa', 'Thhalv10016836m.g' => 'esa', 'Thhalv10016840m.g' => 'esa', 'Thhalv10020994m.g' => 'esa', 'TPR.G10395' => 'tpr', 'TPR.G12552' => 'tpr', 'TPR.G13360' => 'tpr', 'TPR.G13366' => 'tpr', 'TPR.G3079' => 'tpr', 'TWI09G1610' => 'twi', 'TWI15G0668' => 'twi', 'TWI15G0923' => 'twi', 'TWI15G1011' => 'twi', 'TWI15G1215' => 'twi', 'TWI23G0917' => 'twi', 'TWI53G0263' => 'twi', 'TWI59G0125' => 'twi', 'TWI74G0855' => 'twi', 'unitig_22.g6959' => 'ugi', 'vmacro00591' => 'vma', 'vmacro02365' => 'vma', 'vmacro07889' => 'vma', 'vmacro08006' => 'vma', 'vmacro15639' => 'vma', 'vmacro22111' => 'vma', 'VMungo0720G0942' => 'vmu', 'VMungo0720G2741' => 'vmu', 'VMungo0720G2979' => 'vmu', 'VMungo1215G2078' => 'vmu', 'VMungo1383G1337' => 'vmu', 'VMungo1383G2072' => 'vmu', 'Zm00001eb006100' => 'zma', 'Zm00001eb037210' => 'zma', 'Zm00001eb048360' => 'zma', 'Zm00001eb078880' => 'zma', 'Zm00001eb096890' => 'zma', 'Zm00001eb130850' => 'zma', 'Zm00001eb144570' => 'zma', 'Zm00001eb182640' => 'zma', 'Zm00001eb216030' => 'zma', 'Zm00001eb234810' => 'zma', 'Zm00001eb244430' => 'zma', 'Zm00001eb306060' => 'zma', 'Zm00001eb318300' => 'zma', 'Zm00001eb332200' => 'zma', 'Zm00001eb354620' => 'zma', 'Zm00001eb417320' => 'zma', 'Zm00001eb417380' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000703' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000703' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000703' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000703' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151